PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089193.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 333aa    MW: 37055.9 Da    PI: 5.6817
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.1e-11149192755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + ErrRR r+++++  Lr+l+P+      +K++Ka+i+  Av Y+++Lq
  XP_011089193.1 149 ISERRRRGRMKEKLYALRSLVPTI-----TKMDKASIVGDAVLYVRDLQ 192
                     67*********************7.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.046142191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.26E-12144196No hitNo description
SuperFamilySSF474591.44E-16144212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.2E-17144205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-13148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-8149192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MERSCLESGG IPELDPYQYQ YAADHFGLID FMDEAIFDQF IDLIRGENEN ETVANFAAHQ  60
GYDFHGQFFS EAPPAELLDF DGLMGHNAID TDVNNDLGFL NACVKNVSEE GVMDVEESSG  120
TTTTTGTGTC SKRANKKNSS KVDRSRTLIS ERRRRGRMKE KLYALRSLVP TITKMDKASI  180
VGDAVLYVRD LQMQVKKLKS EISSLGGGAT HVQSSYQGRT DGSNGKNNIM SFYPVIKKIF  240
KMEVFEVEKR GFYVRVVSNK GRGIAALLYK ALESLTTFTL ATSNLAASAH NYVFTFTLHI  300
TQGEMDINIQ NMELLIATVF LKQGFEMETS QSA
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089193.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089193.10.0transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLA0A2G9GWF61e-115A0A2G9GWF6_9LAMI; Uncharacterized protein
STRINGMigut.D02290.1.p3e-89(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37822340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.19e-51FER-like regulator of iron uptake