PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089072.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 223aa    MW: 25526.7 Da    PI: 9.5213
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.64.8e-11105148151
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +  +GV+++    +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_011089072.1 105 CVMRGVYFKN--LKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 148
                     568****966..5********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.3E-5105149IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-8106151IPR016177DNA-binding domain
SMARTSM003802.3E-4108163IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-6109153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MVSIRRRKLL GMCSGRSSFL APLSCAFEHG HTPENCAEST KSVSVHPLPL NDNYKPNEET  60
TSETGPGSSN LSASSPPKEH LIQQFPEIKR RKRHRRKQVE NQEQCVMRGV YFKNLKWQAA  120
IKVDKKQIHL GTVGSQEEAA RLYDRAAFMC GREPNFELSE EEKQELRKFK WDEFLAMTRS  180
AITNKKSQRR SGTVPRRKFE ENEWEGEQGR NGFSASEDDA LAP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089072.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089071.11e-167ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_011089072.11e-167ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A4D8ZWT01e-111A0A4D8ZWT0_SALSN; Uncharacterized protein
STRINGEOX938573e-93(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.17e-46ERF family protein