PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011088847.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Nin-like

Protein Properties

Length: 369aa MW: 41685.9 Da PI: 5.163

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011088847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	81.4	9.3e-26	277	327	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++l+d +yF+lpi+dAAk++++c+TvLK+ CR++G+ RWP+Rkiks+ XP_011088847.1 277 TRKLKLKDFVHYFDLPIEDAAKKMNICPTVLKKVCRRNGVLRWPYRKIKSI 327 6789*********************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.006	267	347	IPR003035	RWP-RK domain
Pfam	PF02042	4.9E-22	280	327	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence Send to blast
MANSSTEFTF HDPFREIPST EPSSSFFVEN PTLGPSNLPS HSEQNPLNWP DHHLGSELND 60 ILDPEDPFSD PVIWAFCNAP GDVPGSSGAG PSRFPGEGCS THGILENPVS GDQSLPLPLV 120 SVPRTQYNCI CCQVLREITH TNGMNVKRLE IHGRFGVITH AVLGEYDFDS SFQGQEFQMF 180 DFQEESMQIV KKFLIRYFEA CKQEGYSTLQ DPLSTFYDAL CVGLNNECDD PNDFLQLSPE 240 NAGDFLNNQQ ETLRQPECGS SQGGFMKIPL SMQRERTRKL KLKDFVHYFD LPIEDAAKKM 300 NICPTVLKKV CRRNGVLRWP YRKIKSIERK ISKKVKILDA GDGGEKARAL EDIQRHQQEL 360 AKVYEAFNQ

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence Send to blast

MANSSTEFTF HDPFREIPST EPSSSFFVEN PTLGPSNLPS HSEQNPLNWP DHHLGSELND  60
ILDPEDPFSD PVIWAFCNAP GDVPGSSGAG PSRFPGEGCS THGILENPVS GDQSLPLPLV  120
SVPRTQYNCI CCQVLREITH TNGMNVKRLE IHGRFGVITH AVLGEYDFDS SFQGQEFQMF  180
DFQEESMQIV KKFLIRYFEA CKQEGYSTLQ DPLSTFYDAL CVGLNNECDD PNDFLQLSPE  240
NAGDFLNNQQ ETLRQPECGS SQGGFMKIPL SMQRERTRKL KLKDFVHYFD LPIEDAAKKM  300
NICPTVLKKV CRRNGVLRWP YRKIKSIERK ISKKVKILDA GDGGEKARAL EDIQRHQQEL  360
AKVYEAFNQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011088847.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011088847.1	0.0	uncharacterized protein LOC105169981
TrEMBL	A0A2G9I6A0	1e-167	A0A2G9I6A0_9LAMI; Uncharacterized protein
STRING	Migut.B01423.1.p	1e-142	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3505	20	27

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17150.1	3e-10	Nin-like family protein