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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_011088480.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
| Family |
GATA |
| Protein Properties |
Length: 323aa MW: 35741.1 Da PI: 7.2225 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011088480.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 58 | 1.3e-18 | 239 | 272 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C++C++ kTp+WR gp g+ktLCnaCG+++++ +
XP_011088480.1 239 CTHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGR 272
*******************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MECIEARALK SSFLSQMAMK TTSQVFYNDD VWCLTGINNV ASDDFPVEDL LNLDFSDKEF 60
QDGFFSQEDD VSQKASSYNS SSIFSGTDDF DSLSAGELAV PVDDLENLEW LSQFVDDSTS 120
GLSLLCPAGS FTSNIGTNSG KRVDPVNRPP QNIRAPCFPM RVPSKARSKR SRPNGRPWTL 180
ASPPLSSADS SSTSSSSLGS SSVSPFIFTN PVLDTEWFSS VEKPPAKKQK RKPXXXXRCT 240
HCQVQKTPQW RTGPLGPKTL CNACGVRFKS GRLFPEYRPA CSPTFSQEMH SNSHRKVLEM 300
RRKKEIGEET EPGLTRVVQS MSL
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