 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_011086401.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 318aa MW: 36189.9 Da PI: 4.6077 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011086401.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.2 | 1.6e-19 | 86 | 139 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t++q++ Le+ F +++++ e++ +LAk+lgL+ rqV +WFqNrRa++k
XP_011086401.1 86 KKRRLTPNQVQFLEKSFDEENKLEPERKLQLAKELGLQPRQVAIWFQNRRARYK 139
56789************************************************9 PP
|
| 2 | HD-ZIP_I/II | 126 | 1.7e-40 | 85 | 177 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrl+ +qv++LE+sF+ee+kLeperK +la+eLglqprqva+WFqnrRAR+ktk lEk++++Lk++yd+lk++ ++L ke+e+L++e+++
XP_011086401.1 85 EKKRRLTPNQVQFLEKSFDEENKLEPERKLQLAKELGLQPRQVAIWFQNRRARYKTKLLEKEFDSLKSSYDRLKADYDTLYKENEKLKTEVNS 177
69**************************************************************************************99875 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MEVYDDSRIS NALLKNERLP CTSEVLDSLW VQNSSPSFHA SASMVNFANV QGETKTERPF 60
LPQIDTKAEN CNEGALDGCS FHHPEKKRRL TPNQVQFLEK SFDEENKLEP ERKLQLAKEL 120
GLQPRQVAIW FQNRRARYKT KLLEKEFDSL KSSYDRLKAD YDTLYKENEK LKTEVNSLAE 180
KSRLRDNGKP KTEQCDDPIS PLDLQPNKPI CSQNAAQTVA SKQEDAASSA KSDVFDSDSP 240
HYTDGNHSAA LEPADSSHVF EPDASDFSQD EDDSFNRSCL MPSLSFPKLE VECFDDLQPN 300
SCNLGFPVQD QGTWFWQY
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:8535134}. |
