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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011086321.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 217aa MW: 25661.1 Da PI: 6.2395 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 129 | 3.7e-40 | 32 | 163 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppG+rF Ptd elv yL++k+ + +++ + +v +y+++P++L + k++ ++++wyfF++r ++y++g+r++r++ +gyWka gkd+ XP_011086321.1 32 MPPGMRFLPTDVELVRVYLRHKLIVGSlpQGFQKLFLDVALYQHNPQQLIAmheKLEDDQEDWYFFTPRIRRYPNGQRPERTAGDGYWKAIGKDT 126 79********************77776434455569*************733446667888********************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +v++++ge++g k++L fy+gr+p g+kt+W mhey XP_011086321.1 127 PVVENDGEVIGFKRVLDFYEGRHPGGVKTEWKMHEYL 163 ************************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-47 | 27 | 189 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 46.585 | 32 | 190 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.8E-20 | 33 | 162 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MEEQPLVHHP PEYYDNLMNG ADYCERIMSE PMPPGMRFLP TDVELVRVYL RHKLIVGSLP 60 QGFQKLFLDV ALYQHNPQQL IAMHEKLEDD QEDWYFFTPR IRRYPNGQRP ERTAGDGYWK 120 AIGKDTPVVE NDGEVIGFKR VLDFYEGRHP GGVKTEWKMH EYLTKEQKDH TPASTSMQLN 180 QWVLCKIYKN KRSGKKRKSS MDHVEDDDDF FSFDFPM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-38 | 32 | 196 | 15 | 174 | Stress-induced transcription factor NAC1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011086321.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011086321.1 | 1e-164 | NAC transcription factor 56-like |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-39 | NAC-like, activated by AP3/PI |