PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011085608.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 315aa    MW: 35877.6 Da    PI: 4.6503
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011085608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH246.9e-08171215655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++ r RR++i ++ +eL +l+P       ++++ ae+ + A +YIk+Lq
  XP_011085608.1 171 SIAARERRRKITEKTQELGKLIPGG-----QRMNTAEMFQAAYKYIKYLQ 215
                     67889******************96.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.214165214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-10168219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.66E-8168218No hitNo description
SuperFamilySSF474591.44E-10169224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-5171215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-8171220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MAMSCYPYWR TFQQEFNSGM ATSALAETGL SPELFNDNFE VYPDYAWCNI DHLFEPSDLL  60
CSENCNSLLP DNLSSPTHYN LNMSYLYPEP FRVLQDFEPF HCLKRQKLYD YQQLHSDLKP  120
EGLTDGLHDY RPEVVIPTLP EFPSLPPVYS GGVSCETVSK PVSGGSLSAQ SIAARERRRK  180
ITEKTQELGK LIPGGQRMNT AEMFQAAYKY IKYLQAQVGI LEFMGSYYPQ EDGDSFECEQ  240
VHGLVESWLI QEKLYSIEKC LVPQKLVQEL ASHHQIFESK PQVLDQVRQL ICCTNEVDGA  300
GENLCIHALV SKQQT
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011085608.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085608.20.0transcription factor bHLH52-like
TrEMBLA0A2G9I2V98e-89A0A2G9I2V9_9LAMI; Uncharacterized protein
STRINGMigut.H01308.1.p5e-72(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38562246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.12e-27bHLH family protein