PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011085579.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 318aa    MW: 35639.1 Da    PI: 4.6864
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011085579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH54.71.8e-173483255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L ++++YI+ Lq
  XP_011085579.1 34 RSKHSETEQRRRSKINERFQILRDLIPEN----DQKRDKASFLLEVIQYIQFLQ 83
                    899*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.2E-2231103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.4983282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.46E-1933106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.47E-173487No hitNo description
PfamPF000105.2E-153483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-133888IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MVRTVSHVED EETHDSSSPI AESKRVDQKV NASRSKHSET EQRRRSKINE RFQILRDLIP  60
ENDQKRDKAS FLLEVIQYIQ FLQEKLQMYE GSCQGWSPEP AKFSPWRINS GPVESYGDQS  120
QLDRDLSGHE DNVVLNPTVL SNVQNSVESD LTGSTLYRST DNPPMTMKAL PLNMPPQAPV  180
FESMPPQSHP GSFPDAEQLT QQSRSHFWPG RSCGNDCSVP IYAANEEELK SENGEASISN  240
SYSQGLLNSL TNALQSSGVD LSQTSISVQL DIGKRTNGRN TNTTFNFKDP DDASGLDYGA  300
PLNDIENYEH PQKRFRAD
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011085579.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085579.10.0transcription factor BIM2 isoform X1
TrEMBLA0A2G9HJ801e-160A0A2G9HJ80_9LAMI; Uncharacterized protein
STRINGMigut.H00581.1.p1e-125(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA89471821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-52BES1-interacting Myc-like protein 2