PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011084434.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 695aa    MW: 76903.7 Da    PI: 6.5076
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011084434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.21.5e-057798223
                    EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                    kC++C++ F ++ n++rHir+H
  XP_011084434.1 77 KCEKCPRQFCSPINYRRHIRVH 98
                    7*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.1827698IPR007087Zinc finger, C2H2
SMARTSM003550.00687698IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002807898IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    Send to blast
MPVAKLCTSG IVNAMKSEGG NDYLDTFIRQ AIGKEPLLPF PRTGNSPVQW IQLLHALDQP  60
DLPGWPLMTP VKVQMQKCEK CPRQFCSPIN YRRHIRVHRR SLNVNKESHR NRELLAEFWD  120
KLSPEEAKEI VSLNDVMLKE IPGSSVIRAL TSSLQKPGLW TLPQAYVKAG STLLDIVQAK  180
PSRLPLSSQE LFGILDDASE TTFLCGGASE SLQKYVFDGE AANNSMELKN LVASTSFLFE  240
QKLVKAWVAD KDAEALRCHK LLVEEEEAAQ KKQAELLERK KQKKLRQKEQ KVKEQFYECN  300
ADLDVPIGAA DGLLDVPIGA ADGPISAEGF GSSSPSDSSS NSIEAAPNLD SCIEPIQSKS  360
IESDKDREPK IDANTECLHQ GDCQSNEPQM VAENCHQHLA NNHWQVTGSQ MGNHASQNLQ  420
LLEPEFGQAI GLSEDHPLLN GSKVWTKEHK TENNGESLKP SLSGEICHQM EESNCEVIIG  480
SISVTVNNPA AQQQHCHPYD DQDTSRTQHA MLNNTSEKLL KEAAAQSGPN RMASKLWRPV  540
SHGEAKRISS IERRNKDSER AVPSGKVHDR IMSSERCMPS QSADIDDHDD VKQNNIPCDK  600
NDLKGNVAFS SIAAKEFLSQ RWKEAISADH VKLVLSVGHE PPGCSAIQHD NSMASNNPDR  660
QECSAVCRSG AQVKFRTKPD KCLKTKYIAK PKAIT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1277284ERKKQKKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011084434.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084433.10.0uncharacterized protein LOC105166686 isoform X1
RefseqXP_011084434.10.0uncharacterized protein LOC105166686 isoform X1
TrEMBLA0A2G9HXL10.0A0A2G9HXL1_9LAMI; Uncharacterized protein
TrEMBLA0A4D9BG750.0A0A4D9BG75_SALSN; Uncharacterized protein
STRINGMigut.F01102.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.18e-98C2H2-like zinc finger protein