PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011084333.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 803aa MW: 88563.9 Da PI: 6.4689 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47.8 | 2.4e-15 | 29 | 85 | 5 | 57 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++t+eq+e+Le++++++++p++ +r+++ ++ g++ +q kvWFqNrR +ek+ XP_011084333.1 29 ARYTEEQIEVLEKVYAECSNPNHYRRAQIMREQpilrGINNKQLKVWFQNRRCREKQ 85 579*****************************999********************97 PP | |||||||
2 | START | 22.9 | 1.8e-08 | 167 | 264 | 2 | 97 |
HHHHHHHHHHHHHHHC-TT-EEEE.EXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEE..ECTTEEEEE CS START 2 laeeaaqelvkkalaeepgWvkss.esengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlev..issggalql 93 laee+ +e+++ka ++ +W ++ ++ ++e++ ++ s ++ g a+ra++ ++++ + e+l ++ W++ ++ ++++++ +++gg+++l XP_011084333.1 167 LAEETKKEFLSKAIGTAVNWIPVPgLKLRNPESTGTIYVSATCIGVAARACVTIPGEPIKIIEILKNRL-SWSRSCRNMDVVAKypVENGGTIEL 260 78999*******************967777777777766666*****************8888888888.*************955678899999 PP EEEX CS START 94 mvae 97 ++++ XP_011084333.1 261 IYTQ 264 9876 PP | |||||||
3 | START | 42.2 | 2.1e-14 | 267 | 343 | 127 | 201 |
EEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTX CS START 127 dvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlq 201 ++S++ + p+ ++vR+++l+Sg+li+p+++g s++ ++h dl+++++++++r+l++s+ ++ ++ v++l+ XP_011084333.1 267 EQSISGSDGAPSspvALEFVRGRMLVSGYLIRPCEGG-STIDLLDHLDLEASSVPEVVRPLYESSELMAKQMIVSALH 343 555555554444445899******************9.*****************************99999998886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.4E-14 | 18 | 88 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.68E-13 | 20 | 87 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 14.171 | 22 | 86 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.6E-10 | 23 | 90 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 5.0E-13 | 29 | 85 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.88E-12 | 30 | 87 | No hit | No description |
CDD | cd14686 | 4.81E-5 | 79 | 118 | No hit | No description |
SuperFamily | SSF55961 | 9.75E-12 | 167 | 329 | No hit | No description |
Pfam | PF01852 | 4.8E-5 | 167 | 264 | IPR002913 | START domain |
Pfam | PF01852 | 1.5E-11 | 266 | 343 | IPR002913 | START domain |
Pfam | PF08670 | 8.0E-31 | 660 | 802 | IPR013978 | MEKHLA |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0008289 | Molecular Function | lipid binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 803 aa Download sequence Send to blast |
MARTELAIGE GSQGGRGGRR GRPEGGRYAR YTEEQIEVLE KVYAECSNPN HYRRAQIMRE 60 QPILRGINNK QLKVWFQNRR CREKQKKENG NLALENRRLA TANKMLRQEN DGLQKKLAQV 120 LCENDHLRNQ VITLTSTITT YNLGRQPEAN DPQLPIRIGD NNSLLSLAEE TKKEFLSKAI 180 GTAVNWIPVP GLKLRNPEST GTIYVSATCI GVAARACVTI PGEPIKIIEI LKNRLSWSRS 240 CRNMDVVAKY PVENGGTIEL IYTQVCEQSI SGSDGAPSSP VALEFVRGRM LVSGYLIRPC 300 EGGSTIDLLD HLDLEASSVP EVVRPLYESS ELMAKQMIVS ALHFIEHVGN ETNGKQIHSC 360 HEDPAFLRSV SRRLCRGFND AVNCFSEDGW TLMNVNASDD IIMSIKRTAS FGVGANYDSI 420 ICVKASLLLQ NVIPASLVRL LKEHRSAWMD FNFADHSVAF SKAACYAYPG PTIHNLSGTP 480 VMLGHTNHDD EELEVIRFER SANQQHVSSG DLYHLQVITG MDDTGFGACS ELIFAPIDRT 540 IPNDAALLCS GFRIFLLGSN TGEDTGSSNI APNEALNARN AQAAISHPLS MLIVAFQFPS 600 EADLQEDVAS MARQYVKSVI SSVKNISLRT MSSGSNPVMH SHEANPAMGL KIPESTYFVN 660 LADLICQSYR SSLGVDMVGF NCESTDSMLE QIHHHHYAIL CFSFMSLQAC LYANQAALNM 720 LETTLDNLHM LTVERILDGS NNLSLFSVFP TIMQQGYAIL PPGNCLSVTN RCVSYAQAVV 780 WKVLAPDGSV HCLALALIDW SFV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011084333.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011084333.1 | 0.0 | homeobox-leucine zipper protein REVOLUTA-like isoform X3 | ||||
TrEMBL | A0A4D8ZLS6 | 0.0 | A0A4D8ZLS6_SALSN; Homeobox-leucine zipper protein | ||||
STRING | Migut.F01757.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 0.0 | HD-ZIP family protein |