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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_011084326.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family |
ARF |
Protein Properties |
Length: 676aa MW: 74675.5 Da PI: 6.7718 |
Description |
ARF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_011084326.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 72.9 | 4e-23 | 123 | 223 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88
f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g++W++++iyr++++r++lt+GW++Fv++++L +gD++vF +++
XP_011084326.1 123 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGEVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RTE 213
89****************************986445444..8999*********************************************..458 PP
EE..EEEEE- CS
B3 89 efelvvkvfr 98
++el++++ r
XP_011084326.1 214 NGELCLGIQR 223
9999999877 PP
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2 | Auxin_resp | 113.4 | 2.1e-37 | 291 | 374 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83
aa+ a+++ +FevvY+Prast+eFvv+++ v++a+++++++GmRfkmafetedss++++ +Gtv++v+ dpv WpnS+Wr+L+
XP_011084326.1 291 AASLAASGRPFEVVYYPRASTPEFVVRASAVRAAMRIQWCAGMRFKMAFETEDSSRISWfMGTVSSVQVDDPVYWPNSPWRLLQ 374
678999****************************************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 676 aa
Download sequence Send
to blast |
MINAMNSVGR PMNQVEKCLD PQLWHACAGG MAQIPPINSK VYYFPQGHSE HANKAVDFHE 60 FPRISPLIPC RVSSISYLAD SETDEVYAKM RLVPLGRNEC DVDDEGGLMG FSKNEEKEKP 120 NSFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYSAEPPV QTILAKDVHG EVWKFRHIYR 180 GTPRRHLLTT GWSNFVNQKK LVAGDSIVFL RTENGELCLG IQRAKTGISG GPEVLSGWST 240 GAANCASALY KGFSGSQSES LCVGSVRKRN GSCDSGARER GNVSAESVIE AASLAASGRP 300 FEVVYYPRAS TPEFVVRASA VRAAMRIQWC AGMRFKMAFE TEDSSRISWF MGTVSSVQVD 360 DPVYWPNSPW RLLQVAWDEP ELLQNVKRVS PWLVELVSHI PAIPLSPFSP PRKRPRPPEF 420 PLGQLHMPMT LLRNPLSPSS PLCCLPDNIS SGIQGARHAQ FLLSSSDPHF NNLQMGPHPF 480 NFKPLPKILT GSRLENSNFD PLSCSLQTKS STLSLNENNE TKSPVFLLFG QPILTEQQIS 540 RSCSLDTEEN MGNVSNGSVS AVIQNSPPEA CSEGEFPRLK DQKLELGLET TNCKVFLESE 600 DVGRTLDLSS ISSYEELYRK LASMFSLQRS DTSTNVVYSD AEGATRPTED VPFGDFMKKA 660 RRLTILIESG RENRGI
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Functional Description ? help
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Source |
Description |
UniProt | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). |