PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011084160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bHLH | ||||||||
Protein Properties | Length: 198aa MW: 21931.7 Da PI: 8.1285 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.9 | 1.3e-11 | 131 | 176 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L++l+P+ +k s a++L +Av++I+sLq XP_011084160.1 131 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIRSLQ 176 689*********************7....688*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.246 | 125 | 175 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.31E-15 | 128 | 189 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.15E-12 | 129 | 180 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 5.2E-15 | 130 | 187 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.9E-13 | 131 | 181 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.7E-9 | 131 | 176 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010119 | Biological Process | regulation of stomatal movement | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence Send to blast |
MTDNGSGISR LNSQLSFTRP KEALSRISEE TENVGDGVST DNAQRKSTHS YATAGGFTMW 60 DDTNPLTFSV APPKRAKTIT NDVDDIESQF QFGLPQGALE MASMDKLLHI PQDSVPCKIR 120 AKRGCATHPR SIAERERRTR ISGKLKKLQD LVPNMDKQTS YADMLDLAVQ HIRSLQNQVQ 180 KLNEELDCCT CGCKKTTG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011084160.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011084160.1 | 1e-148 | transcription factor bHLH128 isoform X1 | ||||
Swissprot | Q8H102 | 4e-59 | BH128_ARATH; Transcription factor bHLH128 | ||||
TrEMBL | A0A2G9HAB8 | 1e-108 | A0A2G9HAB8_9LAMI; Uncharacterized protein | ||||
STRING | XP_009620076.1 | 1e-102 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6455 | 23 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05805.1 | 2e-56 | bHLH family protein |
Publications ? help Back to Top | |||
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