PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011083876.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 250aa    MW: 27757.4 Da    PI: 6.8026
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011083876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08149189954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_011083876.1 149 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 189
                     699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-13141198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-14144199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.3E-14146195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-6150189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.40E-6163194No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MDVDFVNKSA AEDQLEMMLM QIDDLPDFSD VDEIPAMLQF PQESDNNNFS VSENLLLDSP  60
TFLPAAASRI SFSGGVHPWA PPQPGSSGGR WESTDECSGP AQRRHSMAAM REMIFRIAAM  120
QPVHIDPESV KPPKRKNVKI SKDPQSVAAR HRRERISERI RILQRLVPGG TKMDTASMLD  180
EAIHYVKFLK NQVQSLERVA VNRPPPPAAG VGFPVAMSSG NYFPAAAKGY HHHHQYESPP  240
PHNVHHLADA
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011083876.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083876.10.0transcription factor HEC2-like
TrEMBLA0A2G9G6X71e-100A0A2G9G6X7_9LAMI; Uncharacterized protein
STRINGMigut.N02717.1.p1e-87(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75223101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-42bHLH family protein