PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011083355.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 320aa    MW: 36149.9 Da    PI: 8.6323
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011083355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.8e-09165212455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR+ri +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_011083355.1 165 SHSLAERVRRERISERMKLLQALVPGC----DKVTGKALMLDEIINYVQSLQ 212
                     8*************************9....555*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-16159226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.46E-10159216No hitNo description
Gene3DG3DSA:4.10.280.101.6E-15161224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.383161211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-6165212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.0E-10167217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MAAFSSSYQQ QHPFHQLLDS SDLLSAIDYK MSEDPNFSLY FYPTDDTLHC LDQTSTKVNN  60
DQGTCVFSVT NKNSMDSSSV LTHNYYDHHH QLIITKNPKK RRNSKQGSSV NSAQSKDMRE  120
VMTKGKKQKK MKGCEENKYC KEGKKEAPAA GYIHVRARRG QATDSHSLAE RVRRERISER  180
MKLLQALVPG CDKVTGKALM LDEIINYVQS LQNQVEFLSM KLASVNPISY DFGMDLESLM  240
VRPPPDQNLS SLPSPLMQSC SPATANPYDP LLDNCLLFQQ SQISNALPQG NRQVLWGVDD  300
QRQKIINQSK ISSSSLFSFH
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011083355.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083355.10.0transcription factor bHLH137
TrEMBLA0A2G9FYC11e-112A0A2G9FYC1_9LAMI; Uncharacterized protein
STRINGVIT_17s0000g00430.t011e-83(Vitis vinifera)
STRINGPGSC0003DMT4000511371e-83(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41162345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.25e-55bHLH family protein