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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_011082709.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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| Family |
HD-ZIP |
| Protein Properties |
Length: 203aa MW: 22345.4 Da PI: 8.0293 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011082709.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 53.6 | 3.8e-17 | 21 | 74 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
+ +++++q++ Le+ F +++ e++ +LA++lg++ rq+ +W+qN+Ra++k+
XP_011082709.1 21 KKRLSQDQVQLLEASFDAAKKLEPERKFQLARELGVPPRQIAIWYQNKRARWKN 74
56799***********************************************95 PP
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| 2 | HD-ZIP_I/II | 108.8 | 3.9e-35 | 20 | 111 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
+k+rls++qv+lLE sF++ +kLeperK +lareLg+ prq+a+W+qn+RAR+k++ lE dy aL+ +++a +++++Lekev++Lr elk+
XP_011082709.1 20 QKKRLSQDQVQLLEASFDAAKKLEPERKFQLARELGVPPRQIAIWYQNKRARWKNQSLELDYGALQVRLEAALADKKQLEKEVDSLRGELKR 111
69*************************************************************************************99986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009646 | Biological Process | response to absence of light |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MMQIGKKTMS LSPSSQSKLQ KKRLSQDQVQ LLEASFDAAK KLEPERKFQL ARELGVPPRQ 60
IAIWYQNKRA RWKNQSLELD YGALQVRLEA ALADKKQLEK EVDSLRGELK RAHAMLFGLR 120
QAQAQAQAQA CVSAPPGSCL SSCCDEGAGS SPNEDVGCSA TWQNGDALQF EELYACLMLG 180
AGRGSNSCGP IIPDGVNERD FWV
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