PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081961.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 310aa    MW: 33934.5 Da    PI: 5.5922
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY932.1e-29145204159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv++sa+dp++++ tYeg+Hnh+
  XP_011081961.1 145 VKDGYHWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQKSANDPSLLVATYEGQHNHH 204
                     58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.7E-29139206IPR003657WRKY domain
PROSITE profilePS5081126.682140206IPR003657WRKY domain
SuperFamilySSF1182903.01E-25142206IPR003657WRKY domain
SMARTSM007741.1E-31145205IPR003657WRKY domain
PfamPF031067.9E-24146204IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MDRTSAACTT SLTIDLNTNP MHNPTDDQPP TSEGNDVGGE RESGLNNEAY DLEQELNRTK  60
SENEKLNDML TIICRKYIEL MQKQSVEELF SSKKRKYDEI ESFDRSIGNS SFGHHCCNEW  120
SPKEIKSNVS RVHVRIDPSD TSLVVKDGYH WRKYGQKVTR DNPSPRAYYK CSFAPSCPVK  180
KKVQKSANDP SLLVATYEGQ HNHHHPSTPG LSVSLPPGGV AGANPSPGST PIGCSSSAAS  240
ILDFTDPIIF SNMQSAIAAT ENTAVQQFFV EQMASSLTRN PSFTAALAAA ITGRILDDVS  300
EDNNDSLSNS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-201442061374WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081961.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081961.10.0probable WRKY transcription factor 40
TrEMBLA0A0D5Y9D34e-91A0A0D5Y9D3_SALMI; WRKY protein
STRINGMigut.E01464.1.p6e-87(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45002242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-64WRKY DNA-binding protein 40