PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081944.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family CPP
Protein Properties Length: 926aa    MW: 99822.8 Da    PI: 6.3832
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR50.44.4e-16511548441
             TCR   4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                     k+CnCkks+Clk+YC+Cfaag +C+e+C C++C N++e
  XP_011081944.1 511 KRCNCKKSQCLKLYCDCFAAGIYCGESCACQGCYNRTE 548
                     89*********************************976 PP
2TCR505.8e-16597635139
             TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                     ++k+gCnCkks ClkkYCeC+++++ Cs+ C+Ce+CkN 
  XP_011081944.1 597 RHKRGCNCKKSMCLKKYCECYQSNVGCSDGCRCEGCKNV 635
                     589***********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011144.2E-15508549IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163434.999509637IPR005172CRC domain
PfamPF036381.2E-12511546IPR005172CRC domain
SMARTSM011141.9E-17597638IPR033467Tesmin/TSO1-like CXC domain
PfamPF036383.3E-11599634IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 926 aa     Download sequence    Send to blast
MDSPKSCKPT TTTAAETAPA QDSPVFSYIS NLSPIQPVKA PPVTQGFPGL NSPPLVFTSP  60
RLNPHSQPTF LKRAQFPGLS AAKISGLDEG RKISVTTTNA SENLAAQLNS RLITSNEKDS  120
YSSVDDQIES PQGCPDQFLT DVENMDSVDP NISSDSTIEK SENMGQPPDA VRGSKELIIK  180
HDETSQRMSV APPSLTTEIK EVHQQDTLID VSAVETDIKQ GGSNSIYQCS KIESKLFGDH  240
ASTNPEQDSM TENVEAEQVC PSNQSSQLLS GSVQIEKDHE NSVGATGAVL IESVLNKVQN  300
DPEAFQLRGI RRRCLQFENA HKVITNQAAQ SPDSGAPVST PINGGQADTV QPMYPRNMNS  360
TIKIPKPSGI GLHLNSIVNA VQAGSTAVVH VKSAQRGNFS IRGKKSVPII NSHLSDNSIS  420
SSVFSPPENV SASTDENRCE SLASLAANSA ASYIVKPSDN SILDPVEDQS TPGNKRKYNN  480
TETDGSAEEL KSSPKKKRKK SSDSSDGDGG KRCNCKKSQC LKLYCDCFAA GIYCGESCAC  540
QGCYNRTEYE DTVLETRQQI ESRNPLAFAP KVVQHISEPA ATSSGEDGTL FTPSSARHKR  600
GCNCKKSMCL KKYCECYQSN VGCSDGCRCE GCKNVYGRKG EYGVIKDVLS VEGTGERREG  660
SFTEQIMAPG NGYNHTELCN PHSLTPLTPA VQFPDHRQDA PKAWLHSGKY FQSPESSLTF  720
VAPYMMSPGS PRNSENNGMI SGNAPGVLDL VSPDQGLFYG NAEMGNEYST VSDQSGKIEN  780
LSSLPGAKEW ASRSFSGNKS YSSVSSLRWR GSPNTPMAQF SGHKPLQVIE LESDFSNTLQ  840
DDTPDILKDS PTPLNAVKVS SPNKKRVSPP HGQQHEFSSS SSDGLRTGRK FILKAVPSFP  900
PLTPCIDSKS VVTEQKNDPQ SCSHNK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A2e-2251163412120Protein lin-54 homolog
5fd3_B2e-2251163412120Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1489498LKSSPKKKRK
2495499KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081944.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081944.10.0protein tesmin/TSO1-like CXC 2
TrEMBLA0A2G9H4T70.0A0A2G9H4T7_9LAMI; Uncharacterized protein
STRINGMigut.E01471.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA69802128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.13e-54TESMIN/TSO1-like CXC 2