PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Basic Information? help Back to Top

TF ID

XP_011081630.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Nin-like

Protein Properties

Length: 339aa MW: 38666.4 Da PI: 6.1333

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011081630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	69.1	6.1e-22	248	297	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++l dl+ yF+lpi +A+k++++c++++K iCR+ G+ RWP+Rkiks+ XP_011081630.1 248 GKMKLRDLAGYFHLPISKASKKMNICPSAIKSICRKEGLLRWPYRKIKSI 297 68999*******************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.21	237	317	IPR003035	RWP-RK domain
Pfam	PF02042	3.5E-19	250	297	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence Send to blast
MADQNANVPH NQELMDAISS AEQLLMFDEN QDDDPLFHSF VDEMVQEPAL NVLGNYGTTD 60 LTGNPLEENT FDQNRNSNDF PQNPAFGNLI RIPIWPVPPS PHTCTCCQTL REIFHVNGNH 120 VLKLDVHGRL GLISHAVLER YNTDTSSQTD HDFCQESISS VKQFLVQYCD DRKREGYVML 180 QDPLSHFYNT LCIGLDSNGR ADANIFLHQT SRGNRQMNQE DDMNQPEEEG NEVRLSKSYI 240 ASQRERTGKM KLRDLAGYFH LPISKASKKM NICPSAIKSI CRKEGLLRWP YRKIKSIEGK 300 IAKKKKSLNS NDADERARAL AEIQELQRKL ANLCDVNVW

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011081630.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011081630.1	0.0	uncharacterized protein LOC105164634 isoform X2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	1e-07	Nin-like family protein