PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081399.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 418aa    MW: 46934.8 Da    PI: 7.014
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.0016171193123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ C+k+F+++  L  H  +H
  XP_011081399.1 171 FQCKACKKVFNSHQALGGHRASH 193
                     89**************9999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.2242244IPR007087Zinc finger, C2H2
SMARTSM003550.232244IPR015880Zinc finger, C2H2-like
PfamPF139120.00192244IPR007087Zinc finger, C2H2
PROSITE patternPS0002802444IPR007087Zinc finger, C2H2
SuperFamilySSF576676.71E-8170193No hitNo description
PROSITE profilePS5015710.014171198IPR007087Zinc finger, C2H2
SMARTSM003550.073171193IPR015880Zinc finger, C2H2-like
PfamPF139125.2E-9171195IPR007087Zinc finger, C2H2
PROSITE patternPS000280173193IPR007087Zinc finger, C2H2
SuperFamilySSF576676.71E-8254281No hitNo description
SMARTSM003550.44259281IPR015880Zinc finger, C2H2-like
PfamPF139121.4E-11259282IPR007087Zinc finger, C2H2
PROSITE profilePS501579.369259281IPR007087Zinc finger, C2H2
PROSITE patternPS000280261281IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MGVEVVENGG KDKPEMSQVI RHYCKVCNRG FNCAGALGGH MRAHVIGDVS HHNNVIPPHG  60
DEHLRGNNKH SYFLRAKTTR FVGYHQPSND EDGELKKPSS FGRFGVEKER VLPMLSSQGS  120
KSELFDHEYS ASSEEEDLAN CLVMLSNKSY ALSSDNKEEN KAKEVAEKGL FQCKACKKVF  180
NSHQALGGHR ASHKKVKGCF AAKSDGLNEE ESSNNNNNNN NNVDEDSIQE DHESFTQTES  240
DATRPMSPLS SSRKRPKMHE CSVCRRVFSS GQALGGHKRC HWLTTSTDNA FIPNFQDFQY  300
DHQSQRLYKK PMLTKPHHDH HDQDQDQDHD HDHNHQLDLN LNLPAPGDSD QNTSRFPAST  360
RLYLKQLAAS ANHSCQQKIE TTVVVEKGDK LRKLSDLRDV SLDGGWLQMG IASTTDIY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081399.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0497434e-49KJ049743.1 Sesamum indicum clone TilSSR_20944 microsatellite Sesame_20944 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081399.10.0zinc finger protein ZAT1
TrEMBLA0A2G9H2I41e-145A0A2G9H2I4_9LAMI; Uncharacterized protein
STRINGMigut.A00958.1.p2e-86(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19102243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17180.18e-26C2H2-like zinc finger protein