PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081340.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 588aa    MW: 65966.4 Da    PI: 5.0611
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.85e-5461421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp+GfrF+Ptdeelv++yL+ k++g++ ++ +vi+e+d++k+ePwdLp+   +k++++ew+fF++rd+ky++g+r+nrat++gyWkatgkd++++
  XP_011081340.1   6 LPKGFRFRPTDEELVSHYLRLKINGHHSSV-QVIPEIDVCKWEPWDLPAlsVIKSDDQEWFFFCPRDRKYPNGHRSNRATEAGYWKATGKDRTIK 99 
                     799************************999.99***************4458889999************************************* PP

             NAM  94 sk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     s+        +++l+g+kktLvfykgrapkge+t+W+mheyr+
  XP_011081340.1 100 SRkslpsgrsNTQLIGMKKTLVFYKGRAPKGERTNWIMHEYRA 142
                     *9888888777777***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.15E-624165IPR003441NAC domain
PROSITE profilePS5100559.0636165IPR003441NAC domain
PfamPF023657.4E-287141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    Send to blast
MKLEALPKGF RFRPTDEELV SHYLRLKING HHSSVQVIPE IDVCKWEPWD LPALSVIKSD  60
DQEWFFFCPR DRKYPNGHRS NRATEAGYWK ATGKDRTIKS RKSLPSGRSN TQLIGMKKTL  120
VFYKGRAPKG ERTNWIMHEY RATEPDLDGS SPGQGDYVLC RLFHKADEKL DHSKYDEVEP  180
TGSSPSTSKS SPDEASSSDL FTEPAGLGIE IFKEPEDVKM KWKDEADTTP AILTPKEIRE  240
SNIADHSGEK TDREVYAPIR EIPLSDEAAY NQFDDKALDP LLSLNYTDSG ACIGSPFPDD  300
FGNDPNGLHF QDGTSEQDVS LSELLEGLQN HGSCFHEQLT SDKTLAASEG LIPEQINALE  360
HTPITLCKAD LCKMYGETDT EMVQAQGQPS PQFQVASSAD HLVSHYAIRK DVSSLDVVSG  420
SLDDSFYHSY QTKDGNTHVS GTGIKIRSRQ PRNQPTILNS TTQGTTSRRI RLLMESGSNP  480
ICYEESKDAS SSEEQESQSL ITKDDEDTTK TWESQHPEDR VEDENKGITQ KRVDENGITK  540
MASMLSTTST VLRRVASYLK TYAVRIYFVI ILLVVSIGLW KCPSFHEF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A8e-50516519168NAC domain-containing protein 19
3swm_B8e-50516519168NAC domain-containing protein 19
3swm_C8e-50516519168NAC domain-containing protein 19
3swm_D8e-50516519168NAC domain-containing protein 19
3swp_A8e-50516519168NAC domain-containing protein 19
3swp_B8e-50516519168NAC domain-containing protein 19
3swp_C8e-50516519168NAC domain-containing protein 19
3swp_D8e-50516519168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081340.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081339.10.0protein NTM1-like 9 isoform X1
TrEMBLA0A2G9G5440.0A0A2G9G544_9LAMI; Uncharacterized protein
STRINGMigut.A01059.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-110NAC transcription factor-like 9