PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011080799.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 329aa    MW: 37043.3 Da    PI: 5.4317
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011080799.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.4e-12157202454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h  +Er+RR+++ + f +L +++P       kKl+Ka+iLe A++YIk L
  XP_011080799.1 157 DHLVAERKRREKLGQLFITLSKVVPGI-----KKLDKASILEDAIDYIKIL 202
                     58899********************97.....7***************977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.694153202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.2E-15157215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.53E-12158207No hitNo description
PfamPF000102.2E-9158202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-16158213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.5E-14159208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MTGVPCKEGM EMEMEEYFDE MFGVKANKSN IPAHHEIFTS HPFSTNTTNQ LVEYPPSWNL  60
SCTTQQTTPK NVPSSSASAS ASAYQLIYVE NKNAIPSLEE SLVHDQFVSP YNGLTANLSS  120
NTLLNFSSPV LINQHDDLSK RVSCSSLPVR STLQARDHLV AERKRREKLG QLFITLSKVV  180
PGIKKLDKAS ILEDAIDYIK ILEEQIRVLE IEQVEKRSED IDNSTSKESS NIIDDSMNEL  240
SAASAIKVRI SDRNVLIKIL CKKQKGFMSR IHMEMEKMNL CEVDVRVMPF GRDALDITIL  300
AQMQSELCVT VKDIVDHLDM AFFSPPHMQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161166ERKRRE
2162167RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011080799.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080799.10.0transcription factor bHLH18-like isoform X2
TrEMBLA0A2G9HXX11e-61A0A2G9HXX1_9LAMI; Uncharacterized protein
STRINGXP_009607937.13e-48(Nicotiana tomentosiformis)
STRINGMigut.C01371.1.p1e-47(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA88641628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-39bHLH family protein