PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Basic Information? help Back to Top

TF ID

XP_011080403.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

HB-other

Protein Properties

Length: 527aa MW: 59049.3 Da PI: 7.611

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011080403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62	9.2e-20	26	81	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kRt t+ q+++Le+++++++yp+++++ +LA+++gLte+qV+ WF+ rR k+k+ XP_011080403.1 26 KKRTVKTRAQVQALEAFYNEHKYPTESMKIQLAESIGLTEKQVSGWFCHRRLKDKR 81 8*****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.7E-22	8	81	IPR009057	Homeodomain-like
PROSITE profile	PS50071	17.135	22	82	IPR001356	Homeobox domain
SMART	SM00389	1.1E-20	24	86	IPR001356	Homeobox domain
SuperFamily	SSF46689	2.99E-18	24	84	IPR009057	Homeodomain-like
CDD	cd00086	9.25E-18	26	81	No hit	No description
Pfam	PF00046	2.8E-17	26	81	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence Send to blast
MEEDRNAVES GEMHSEDDKA LLEKNKKRTV KTRAQVQALE AFYNEHKYPT ESMKIQLAES 60 IGLTEKQVSG WFCHRRLKDK RLMNGDNYVT GKQDRSSGVI QDRGSGLRQD SCGSTKQGDD 120 RNFDTKEVES GRLTLQEYSA AELTFEHGGH CSGNHNRMDD ASSGSSPSLR NMSNHHKDDH 180 FDVATSRYLI PKFPRDVTGV KTRSGPSGYL KVKGLVENSA ITAVKRQLGK HYQEDGPPLG 240 IEFDPLPPGA FESLMQDPVD ETCYTEEAVR PASPDASKIR QLPKFGKGCE YNSSVASRSS 300 NMDRTGFKVP QGPDFPDTYV HQKYKQNTNL SPNGAYYPWR SSSEELPKVS GREISGSESK 360 DEYGVRYRQA QSVEVMRMSS VSSNCHQQHF GGKSRGDEET SFHRYIDMCR KSSPGEKLAD 420 GSSNLAVKGF EYHNYFDKMQ PRQQIAKDGK TCAQRRIINE NMVNISGKNS SAAPKRMRNE 480 FPQQPLLKRS SAIDNQLETY RVIRSAAEMP SSYSEDEGSA ETSSSVE

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence Send to blast

MEEDRNAVES GEMHSEDDKA LLEKNKKRTV KTRAQVQALE AFYNEHKYPT ESMKIQLAES  60
IGLTEKQVSG WFCHRRLKDK RLMNGDNYVT GKQDRSSGVI QDRGSGLRQD SCGSTKQGDD  120
RNFDTKEVES GRLTLQEYSA AELTFEHGGH CSGNHNRMDD ASSGSSPSLR NMSNHHKDDH  180
FDVATSRYLI PKFPRDVTGV KTRSGPSGYL KVKGLVENSA ITAVKRQLGK HYQEDGPPLG  240
IEFDPLPPGA FESLMQDPVD ETCYTEEAVR PASPDASKIR QLPKFGKGCE YNSSVASRSS  300
NMDRTGFKVP QGPDFPDTYV HQKYKQNTNL SPNGAYYPWR SSSEELPKVS GREISGSESK  360
DEYGVRYRQA QSVEVMRMSS VSSNCHQQHF GGKSRGDEET SFHRYIDMCR KSSPGEKLAD  420
GSSNLAVKGF EYHNYFDKMQ PRQQIAKDGK TCAQRRIINE NMVNISGKNS SAAPKRMRNE  480
FPQQPLLKRS SAIDNQLETY RVIRSAAEMP SSYSEDEGSA ETSSSVE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011080403.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011080403.1	0.0	uncharacterized protein LOC105163662 isoform X3
TrEMBL	A0A2G9HIP9	0.0	A0A2G9HIP9_9LAMI; Transcription factor HEX
STRING	Migut.N02368.1.p	1e-180	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	5e-79	HB-other family protein