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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_011080062.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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| Family |
NAC |
| Protein Properties |
Length: 290aa MW: 33064.8 Da PI: 6.5544 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011080062.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 163.2 | 9.9e-51 | 10 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrF P+d+elv++yL kk+++++++ ++ e+d++++ePw+Lp +k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++vl+
XP_011080062.1 10 LPPGFRFYPSDDELVCHYLYKKIANEQVHR-GTLVEIDLHTCEPWQLPDVAKLNSNEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRAVLDP 103
79*************************999.78***************87778899**************************************9 PP
NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129
++++vg++ktLvfyk+rap+g kt W+mhe+rle
XP_011080062.1 104 rSRAVVGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 138
56677***************************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MGLREIGETL PPGFRFYPSD DELVCHYLYK KIANEQVHRG TLVEIDLHTC EPWQLPDVAK 60
LNSNEWYFFS FRDRKYATGF RTNRATTSGY WKATGKDRAV LDPRSRAVVG MRKTLVFYKN 120
RAPNGIKTGW IMHEFRLENP NVPPKEDWVL CRVFHKSRSS SSSDHHHHQN SKESSIIPHS 180
TDLYADSTAV ATSPNLAASP TNNDIQHAYQ NIITSFFHTQ NPSTSLGLTS SPLDHPAAYL 240
HDCMQPAQNR MVLEAKCEDD YGFLFDFDAS NGVPSSLEDM GFDDDHHHDM
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-48 | 1 | 160 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-48 | 1 | 160 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-48 | 1 | 160 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-48 | 1 | 160 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-48 | 1 | 160 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 2e-48 | 1 | 160 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 2e-48 | 1 | 160 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 2e-48 | 1 | 160 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 2e-48 | 1 | 160 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 2e-48 | 1 | 160 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 2e-48 | 1 | 160 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 2e-48 | 1 | 160 | 7 | 172 | NAC domain-containing protein 19 |
| 4dul_A | 2e-48 | 1 | 160 | 4 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 2e-48 | 1 | 160 | 4 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by auxin. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ047352 | 2e-56 | KJ047352.1 Sesamum indicum clone TilSSR_18553 microsatellite Sesame_18553 sequence. |
| Publications
? help Back to Top |
- Le Hénanff G, et al.
Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
J. Exp. Bot., 2013. 64(16): p. 4877-93
[PMID:24043850] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
Plant Physiol., 2015. 169(2): p. 1275-91
[PMID:26304848] - Huo X,Wang C,Teng Y,Liu X
Identification of miRNAs associated with dark-induced senescence in Arabidopsis.
BMC Plant Biol., 2015. 15: p. 266
[PMID:26530097] - Chen X, et al.
Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis.
Plant Physiol., 2016. 170(4): p. 2136-45
[PMID:26850273] - Liu C,Wang B,Li Z,Peng Z,Zhang J
TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
Plant Physiol., 2018. 176(1): p. 742-756
[PMID:29122985]
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