PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011079069.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 468aa    MW: 51572.7 Da    PI: 8.9179
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011079069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.5e-10183223545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  XP_011079069.1 183 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 223
                     7889************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-8179242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.438181225IPR004827Basic-leucine zipper domain
PfamPF001704.4E-7183223IPR004827Basic-leucine zipper domain
CDDcd147089.87E-22183235No hitNo description
SuperFamilySSF579591.04E-6183226No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-7184228No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141442.4E-31266340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MGSRTAKIGA DDNRRVTSGM PSFISQIPVS NPMSKEVNAT QSSRISDFGV LEQYLGFRVG  60
DAANVSRNPV FAPTVNSQTM STDLQSGVFN KSLAATNGNI SAAFLGSQAV QLQKGSDLNV  120
VMATGAQHEN WGESNMADSS SRTDTSTDVD PEDKNQMNEM GQSAAVTVSD SSDKSKEKTL  180
DQKTLRRLAQ NREAARKSRL RKKAYVQQLE NSRLKLTQLE QELQRARQQG IFISSIGDQS  240
NAGSGNGALA FDAEYARWME EQNKRINELR TAVNSHASDT ELRTVVDNVT TQFNDIFRLK  300
GNAAKADVFH ILSGMWKTPA ERCFMWIGGF RPSELLKLLV NQLEPLTEQQ MTAIYNLQQS  360
SHQAEDALSQ GMEALQHSLA ETIANGSSGP ESSSGNVANY MGQMAMAMGK LGTLEGFLRQ  420
ADNLRQQTLQ QMHRTLTTRQ SARALLLINE YFSRLRALSS LWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011079069.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079069.10.0transcription factor TGA2.2
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A068UMV10.0A0A068UMV1_COFCA; Uncharacterized protein
STRINGXP_009759888.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-141bZIP family protein