PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011078755.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

bZIP

Protein Properties

Length: 471aa MW: 52097.9 Da PI: 6.8845

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011078755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.1	2.4e-15	246	301	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr rr+ +NRe+ArrsR+RK+a + eLe+ +L+ eN++L k+l ++ ++ + XP_011078755.1 246 DAKRMRRMLSNRESARRSRRRKQAHLTELETQGTQLKVENSSLLKRLTDITHKYNE 301 68********************************************9999888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.6E-16	244	308	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.013	246	301	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.7E-13	247	300	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.66E-11	248	299	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.1E-11	248	300	No hit	No description
PROSITE pattern	PS00036	0	251	266	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	3.5E-36	315	436	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence Send to blast
MDRMFQVDEI PDQLWSPHSP IRLSLEEEEA DYPSSSSITT TAASKMMRMN RSSSEWAFQR 60 FLQETAEPDR TTTTLQSPSS SMHPPHNEEV VEIKENHHYS LVVGANSNQQ QPEEAAGAAA 120 GPPPDIPIDS KEYQTYLKSR LQLACAAVAL TWASNHKAQE SAATVSPASN PSQLNSHINH 180 KASGQDSSKL QEIDAGEPVS LSPLPAVFKK SAAQVKSVTS GSSVEQSDDD EAEGENEATQ 240 NMDATDAKRM RRMLSNRESA RRSRRRKQAH LTELETQGTQ LKVENSSLLK RLTDITHKYN 300 EAAVDNRVLK ADVETLRAKV KMAEETVKRV TGLNPLFQAM SEISTIAMAS FVNSPDTSAD 360 VAMPVQDDLK QYYHHTPSNS HTSVGNHTIQ NGIMDIAPGE NVQSNATTAV GSNEKGRTVS 420 MPRVASLEHL QKRIRVSSEN KDIHVYRRPK KEKRRHQDTS ILLSGKRTQV T

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence Send to blast

MDRMFQVDEI PDQLWSPHSP IRLSLEEEEA DYPSSSSITT TAASKMMRMN RSSSEWAFQR  60
FLQETAEPDR TTTTLQSPSS SMHPPHNEEV VEIKENHHYS LVVGANSNQQ QPEEAAGAAA  120
GPPPDIPIDS KEYQTYLKSR LQLACAAVAL TWASNHKAQE SAATVSPASN PSQLNSHINH  180
KASGQDSSKL QEIDAGEPVS LSPLPAVFKK SAAQVKSVTS GSSVEQSDDD EAEGENEATQ  240
NMDATDAKRM RRMLSNRESA RRSRRRKQAH LTELETQGTQ LKVENSSLLK RLTDITHKYN  300
EAAVDNRVLK ADVETLRAKV KMAEETVKRV TGLNPLFQAM SEISTIAMAS FVNSPDTSAD  360
VAMPVQDDLK QYYHHTPSNS HTSVGNHTIQ NGIMDIAPGE NVQSNATTAV GSNEKGRTVS  420
MPRVASLEHL QKRIRVSSEN KDIHVYRRPK KEKRRHQDTS ILLSGKRTQV T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	260	267	RRSRRRKQ
2	262	267	SRRRKQ
3	448	454	PKKEKRR

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011078755.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020549671.1	0.0	light-inducible protein CPRF2-like
Swissprot	Q99090	1e-113	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A172W5J7	0.0	A0A172W5J7_AVIMR; Putative light inducible protein CPRF2
STRING	Migut.B01086.1.p	1e-163	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2934	24	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	3e-58	bZIP family protein

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]