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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011078371.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | ERF | ||||||||
Protein Properties | Length: 164aa MW: 18206.6 Da PI: 7.3444 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.8 | 9.4e-12 | 15 | 58 | 3 | 50 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaar 50 + GV+++k +g+++A+I +p kr +lg+f t+eeA+ka+ + XP_011078371.1 15 FIGVSRRK-SGKYAARITHP-----LmkKRLWLGSFSTPEEAYKAYLSKK 58 67***999.7*********7.....235******************7665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 12.154 | 14 | 54 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.3E-13 | 14 | 54 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 7.5E-5 | 14 | 60 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.75E-11 | 15 | 59 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 2.34E-14 | 15 | 54 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
MESKKSQWAS ERREFIGVSR RKSGKYAARI THPLMKKRLW LGSFSTPEEA YKAYLSKKKS 60 SVQDSSSSDL SSETDHANAV KEESFGENNI PQLNQEVKFG VLNGVQIVDR NGFLIGEFSK 120 LDDLSICASK DGALLGCPDV GVSKLYELDQ TLINVWDLGP TLCI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011078371.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011078371.1 | 1e-119 | ethylene-responsive transcription factor 10-like | ||||
TrEMBL | A0A2G9GIW9 | 4e-33 | A0A2G9GIW9_9LAMI; Uncharacterized protein | ||||
STRING | Migut.E00336.1.p | 1e-24 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5075 | 15 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 9e-11 | ERF family protein |