PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011078350.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Trihelix

Protein Properties

Length: 300aa MW: 35246.4 Da PI: 4.3525

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011078350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	41.1	4.8e-13	71	154	2	87
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 W ++e aL+ea e+ +l+ ++l++ +W+ev +k+ + g+er+ ++C++ ++ l+++ykk+++ +++ + s+++yf++++a XP_011078350.1 71 WNEEESFALLEAWGERYMELGWRSLRAEDWAEVTEKVlEMSGVERTEVECRNQLDVLKNKYKKERAKVESG---HGSKWVYFKKMDA 154 *********************************996678********************999986...6779*****85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.4E-19	69	155	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MRNPNSYTYR THNGIQFEDS DSDENEEKNP DQSYTQNGNF YNYEDSKRHP KKRKLESCVS 60 NYEFAPRRDI WNEEESFALL EAWGERYMEL GWRSLRAEDW AEVTEKVLEM SGVERTEVEC 120 RNQLDVLKNK YKKERAKVES GHGSKWVYFK KMDALLNTST RGHCGLGCGV DSGEYVFMNP 180 RVYLDKSNVL DEMRDSPGQS DEDNEDDQDE DLGAHKEDDG ESARLLADSI QRFGDIYEKI 240 EESKRKQMLE LEAMRQDFQR ELELQKKQIF ERAQAEIARI REMDDEEDDN TDTSVENLGD

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011078350.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011078350.1	0.0	trihelix transcription factor ASIL2
Refseq	XP_011078351.1	0.0	trihelix transcription factor ASIL2
TrEMBL	A0A2G9H1F0	1e-143	A0A2G9H1F0_9LAMI; Transcription factor GT-2
STRING	Migut.K00459.1.p	1e-142	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12060	20	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	8e-82	Trihelix family protein