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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011077885.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 353aa MW: 39618.2 Da PI: 10.0749 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.2 | 6.2e-07 | 35 | 97 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e +r rr NRe+Ar +R++a eL + ++ L++eNk Lkke e ke+ +lk + XP_011077885.1 35 EREARRLRRILANRESARQTIRRRQAMHLELIKQAADLSEENKNLKKEKELAVKEYTSLKGRN 97 7999*******************************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 1.9E-6 | 35 | 97 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 7.7E-8 | 35 | 99 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.358 | 37 | 100 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.04E-6 | 39 | 94 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-5 | 39 | 94 | No hit | No description |
CDD | cd14702 | 7.62E-9 | 44 | 90 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence Send to blast |
MPRFPPSFIA PVSREPCSLL LPIPLRSRQN LTEAEREARR LRRILANRES ARQTIRRRQA 60 MHLELIKQAA DLSEENKNLK KEKELAVKEY TSLKGRNEFL KLQLANIKKA EQREMQEAPN 120 PSAEEIPSSA TTGAPILLYY QPSISPFLWP SIFASSNGCH LQCASRSDII SSAMHRIDMP 180 SLNQGQELYT KLGHPLFVLA VPWLLPFLSG SNTIHSHCDT NKRQNETSST RQCSFSSSSD 240 SLFVKDEHQL ISNLNMMMEA SSSARAMPVE NVCAAGFTSL ADETCNFTAV SAPGHTSRGL 300 AKKNQEPIIR RNEDPENVFA ATTARRKRKE LMKLKNNRSQ LVHIHSKNLS VSG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 324 | 329 | RRKRKE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011077885.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077885.1 | 0.0 | uncharacterized protein LOC105161771 isoform X4 | ||||
TrEMBL | A0A2G9HGZ6 | 3e-74 | A0A2G9HGZ6_9LAMI; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 4e-18 | bZIP family protein |