PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011077219.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 179aa    MW: 19194.2 Da    PI: 10.1801
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011077219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.00154567123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_011077219.1 45 FECKTCNRQFPSFQALGGHRASH 67
                    89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.14E-843114No hitNo description
PfamPF139122.9E-134469IPR007087Zinc finger, C2H2
SMARTSM003550.164567IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.8274572IPR007087Zinc finger, C2H2
PROSITE patternPS0002804767IPR007087Zinc finger, C2H2
PfamPF139126.3E-1091116IPR007087Zinc finger, C2H2
SMARTSM003550.592114IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.05892119IPR007087Zinc finger, C2H2
PROSITE patternPS00028094114IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MMKRCREGSA DVEDVSSMAN CLMLLSGDRA AAAAAAGGGV FTRVFECKTC NRQFPSFQAL  60
GGHRASHKKP RLQAGGDHLL RASSSPPKPK THECSICGLE FAIGQALGGH MRRHRAAMND  120
QNQQSRSPPL PSSVLSLSPP LIVKKSKSTR VLCLDLNLTP SENKFLFGKV AAPAVDCFF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011077219.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020548814.11e-129zinc finger protein ZAT11-like
TrEMBLA0A2Z7DFY24e-68A0A2Z7DFY2_9LAMI; Uncharacterized protein
STRINGMigut.F00795.1.p6e-64(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.17e-37C2H2 family protein