PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076995.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family MYB
Protein Properties Length: 1758aa    MW: 192138 Da    PI: 5.8885
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.72.7e-08835876346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +W++eE e+++d  + +G++ + +I++ +  ++t  +c+++++k
   XP_011076995.1 835 PWSPEEKEIFIDKLAAFGKD-FGKISSFLD-HKTVADCIEFYYK 876
                      8*****************99.*********.***********98 PP
2Myb_DNA-binding29.61.6e-0910521092345
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding    3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45  
                        WT eE   +++av+ +G++ + +I++++  +R+ +qck ++ 
   XP_011076995.1 1052 DWTDEEKSVFIHAVASYGKD-FLKISECVR-TRSINQCKVFFS 1092
                       5*****************99.*********.********8876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.86E-14819881IPR009057Homeodomain-like
PROSITE profilePS5129317.377831882IPR017884SANT domain
SMARTSM007172.1E-9832880IPR001005SANT/Myb domain
PfamPF002494.8E-6834876IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.8E-4835876IPR009057Homeodomain-like
PROSITE profilePS5129311.45110481099IPR017884SANT domain
SMARTSM007177.1E-810491097IPR001005SANT/Myb domain
SuperFamilySSF466891.09E-1010501099IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-510511093IPR009057Homeodomain-like
PfamPF002494.3E-810521092IPR001005SANT/Myb domain
CDDcd001678.93E-710531091No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1758 aa     Download sequence    Send to blast
MPPEPLPWDR RDFRKHERSG SDPRLGGGGF GGGGPHRWRE QHHHPHAPPP HPPPYHHQQQ  60
QQQRWYSDFR SSRPLPPGHG KQAGWHMYPD DAGHGFMPFG SRYGDRNLED ENCRPFGSRG  120
DGRYFRNSRE NRGSFAQKDW KAPSWEAAAS PNGPGRPTTE VNNLRSIENT QTCHDSSSSK  180
SSDASQPPSN SANLSNQSQS LVKENYDKNV STADGRTSTD QKTEKENCLG STDWKPLKWT  240
RSGSLTSRGS GFSHSSSSKT MGMDSTETVA EVAPKNATPI QSPSAEAAAC VISTAVVQSD  300
ETGSRKKPRL GWGEGLAKYE KKKVEGPEDD ATKNELVFNV TNTETMQSPA VNLSNKSPTA  360
PSLSDCASPA TPSSVACSSS PGIEEKESIK EANVNHDTTN LSRSPSIVSQ THYDGPNFNL  420
ENLELASIVN LSSLINELLQ SDDPSSAETG YVRTTSINKL LVWKVEILKA LEITESEIDS  480
LETELKSLIV ESGRCCPHPA GSSSLPGGCK LKPCEGGLVT ASSFAIRPAT LHGVSSREMI  540
VEDVPVALED EHAVLKDEDI DSPGSATSKL VEVLPAGEGI FPSETAEHME GCVNQHVENS  600
SNLDENHPMN GLIDEGNFGC VDNHVLNGIT RCEDLASVSD VHYDVEDIYD SIFSSNKDSA  660
NRALEELNKL LPAKWCPFDA CTASSVSSLH RDAELVKEKF LTRKRFLRFK EKVLTLRFKV  720
FQHFWKEGRL VSTRKLRVKT QKKFDPSLNG HRKNRSTSRS RVSSYAGGPQ TVPADEVIAF  780
VNGLLSESAC KPYRNTLKMP ALILDKEMKM SRFISKNGLV EDPCAVEKER SMINPWSPEE  840
KEIFIDKLAA FGKDFGKISS FLDHKTVADC IEFYYKNHKS EGFEKARKNP DFVKQKKSQS  900
TTYMVASGKR WNRESNAASL DMLGAASEIA ANVDDTAEIQ QRTSKFCFGA STSYKDPKGD  960
DGPLRRSNSL DMYNNKRETV AADVLAGICG SVSSEAISSC ITSSVDPGDG YQDWRYPRVG  1020
SSIKRPLTPE VTQNVVDDEC SDESCGELDP TDWTDEEKSV FIHAVASYGK DFLKISECVR  1080
TRSINQCKVF FSKARKCLGL DLIQTGAGNA ASGDVNGDGS DIEDGCTTET GTVNNASEYE  1140
MEEDLPPPDM KSNHESDIVG AQNLRSDLKM SEKNNGLDPL DCMAGEPPLK NLLTGDSRVD  1200
DKPGSDFNVE IKEQNGADVE FVSTEGCETT VASSSTMSGQ RAEEDDDLHL QKGLSEAEKK  1260
ALVEVSDGHC GKENRQRFLL PGANLNNKTV EERDFNSGDV SGISCAISEM KSEPQAAGIV  1320
SHPSFDAHSF MQVDKVSGYQ KKADIETCSA EKSCVSSLKQ NGHLASVKSS TLFSVPVEYR  1380
NSTNHNNASV DVGANMHSEK TVQTCDRQHH LSISSLSDSV ESQIPRAHLT SMQTMKGISG  1440
NVNCKKQYSL QNVPKKDGDL QSGRHTSFFL EKCNSSTQQS RVGEAPFQSL EPCREHPKPQ  1500
AGSSSDVDKY SRKGDVKLFG KVLISSQQKP NSCAQEADYS NSQDCKAVHQ SLNLKLSSDQ  1560
KVNCDSAQSK FDCNNYVGSE TIPVTSFGFW DGNRIQTGYP PLPDSALLLT KYPAAFNNGV  1620
MPPPLHGVIR SSDCSSNGVS VFPSSELSSS NGLADYQVLR NRDLQSFTLD IKQPQDVLFT  1680
EMQRRNRFDL APGMQQQARG MLGIDVVGRG GVLVGGQCSG VSDPVAAIRM HYAKAGQLSL  1740
QAGNVIKEDD RWRSNGGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4a69_C2e-18794884494NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D2e-18794884494NUCLEAR RECEPTOR COREPRESSOR 2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076995.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0699642e-54KJ069964.1 Sesamum indicum clone TilSSR_41165 microsatellite Sesame_41165 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020548929.10.0uncharacterized protein LOC105161106
TrEMBLA0A2G9H3B70.0A0A2G9H3B7_9LAMI; Nuclear receptor coregulator SMRT/SMRTER
STRINGMigut.F01767.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59042332
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.11e-147MYB family protein