PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011076673.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 27920.5 Da PI: 7.7684 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.4 | 2.9e-14 | 75 | 120 | 3 | 53 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 r+h+e+E+rRRdriN +++Lr+l+Pk+ +K++Ka+ L ++v+++k+ XP_011076673.1 75 RSHSEAEKRRRDRINAQLATLRKLIPKS-----EKMDKAALLGQVVDHVKE 120 78*************************8.....8**************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 6.54E-13 | 71 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.593 | 72 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.7E-12 | 75 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.3E-14 | 75 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.93E-11 | 75 | 123 | No hit | No description |
SMART | SM00353 | 6.5E-12 | 78 | 127 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:3.30.70.260 | 7.1E-5 | 159 | 205 | No hit | No description |
PROSITE profile | PS51671 | 9.698 | 159 | 239 | IPR002912 | ACT domain |
CDD | cd04873 | 1.92E-7 | 161 | 228 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008152 | Biological Process | metabolic process | ||||
GO:0016597 | Molecular Function | amino acid binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MENCFWSEEY CASWNYGQAD VDKDGTLMVP WLPPAAADAA AAALQYHCSP PAGGVPPWTP 60 SFEGAAEDRT ASASRSHSEA EKRRRDRINA QLATLRKLIP KSEKMDKAAL LGQVVDHVKE 120 QSERAKEASK FSTIPTETDE VIIEHMNARE TAPQNIYVSA TVCCDDRPEL FAELNSALKS 180 LAVTIVKAEI TSLGGRTKSN FVLCAKDTGG AERNSCTSLL QQSLKLALSR VVISSGMSSY 240 SARSKRQRFF HPNPR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011076673.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076673.2 | 0.0 | transcription factor bHLH51 | ||||
TrEMBL | A0A2G9GF97 | 1e-109 | A0A2G9GF97_9LAMI; Uncharacterized protein | ||||
STRING | Migut.F00663.1.p | 6e-91 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5820 | 22 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 1e-37 | bHLH family protein |