PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_011076504.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

bHLH

Protein Properties

Length: 245aa MW: 27354.8 Da PI: 5.0596

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011076504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.4	1.9e-06	68	96	1	29
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk 29 ++ +h +Er+RR+++ ++ +r+llP XP_011076504.1 68 KKIMHRDIERQRRQEMSGLYASIRSLLPL 96 5789************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.62E-10	66	124	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	9.432	67	118	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.03E-5	68	112	No hit	No description
Gene3D	G3DSA:4.10.280.10	5.2E-6	69	129	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence Send to blast
MFPLQSNALV FDDIHEFLEQ DNVLEDLLAD CAALEGNEHT ADQAGVKKSA SSAGGVQENK 60 EESSSEIKKI MHRDIERQRR QEMSGLYASI RSLLPLEYIK AVNYIKHMQK KIDEMKMRRD 120 KLKRLSNSLG PSSDADQERN SDTSGSSNCV SVNVDVCQGG VEILISSSLN EGNFPLSKVL 180 EDLLRRELNV LSCVSTRADG QSVHKIQIEV NNMYTASLQF SQVNDLRSID LAELRDRLAN 240 VIKLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	123	MRRDKLKR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011076504.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011076269.1	1e-107	transcription factor bHLH36-like
TrEMBL	A0A2G9G1L6	1e-72	A0A2G9G1L6_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	2e-28	bHLH family protein