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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011076502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bHLH | ||||||||
Protein Properties | Length: 211aa MW: 23965.7 Da PI: 10.5969 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.4 | 1.3e-13 | 59 | 111 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 r+ h +Er+RR+++ s ++ Lr+llP ++K s ++ ++Av+YIk+++ XP_011076502.1 59 RKIVHRDIERQRRQQMASLYASLRSLLPLeY---IKGKRSISDHMQEAVNYIKHME 111 5678*************************77...********************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.20E-10 | 57 | 115 | No hit | No description |
PROSITE profile | PS50888 | 14.183 | 58 | 110 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.2E-10 | 59 | 127 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 8.64E-13 | 59 | 127 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.2E-11 | 60 | 111 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.6E-5 | 64 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MFPLQHSGNQ FQGPSALGQD LSVDRAFLDS SSNLVARSTK KRQTRAKSGF QEPNDCKLRK 60 IVHRDIERQR RQQMASLYAS LRSLLPLEYI KGKRSISDHM QEAVNYIKHM EKNTKELRMR 120 RDKLMKRLSK RTGSEISVRL PNCVTVSCCP NGGAVEILIS CASKEQQGFP LSRVLMELLN 180 TGLNIVSCIS TKANDRFLHR IQTEVINYGS L |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011076502.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076502.2 | 1e-151 | transcription factor bHLH120-like | ||||
TrEMBL | A0A2G9HSD7 | 1e-72 | A0A2G9HSD7_9LAMI; Uncharacterized protein | ||||
STRING | XP_009624565.1 | 7e-54 | (Nicotiana tomentosiformis) | ||||
STRING | PGSC0003DMT400019550 | 4e-54 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA598 | 24 | 109 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 2e-35 | bHLH family protein |