PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076502.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 211aa    MW: 23965.7 Da    PI: 10.5969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-1359111155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     r+  h  +Er+RR+++ s ++ Lr+llP       ++K s ++  ++Av+YIk+++
  XP_011076502.1  59 RKIVHRDIERQRRQQMASLYASLRSLLPLeY---IKGKRSISDHMQEAVNYIKHME 111
                     5678*************************77...********************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.20E-1057115No hitNo description
PROSITE profilePS5088814.18358110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-1059127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.64E-1359127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.2E-1160111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-564116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MFPLQHSGNQ FQGPSALGQD LSVDRAFLDS SSNLVARSTK KRQTRAKSGF QEPNDCKLRK  60
IVHRDIERQR RQQMASLYAS LRSLLPLEYI KGKRSISDHM QEAVNYIKHM EKNTKELRMR  120
RDKLMKRLSK RTGSEISVRL PNCVTVSCCP NGGAVEILIS CASKEQQGFP LSRVLMELLN  180
TGLNIVSCIS TKANDRFLHR IQTEVINYGS L
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076502.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076502.21e-151transcription factor bHLH120-like
TrEMBLA0A2G9HSD71e-72A0A2G9HSD7_9LAMI; Uncharacterized protein
STRINGXP_009624565.17e-54(Nicotiana tomentosiformis)
STRINGPGSC0003DMT4000195504e-54(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.12e-35bHLH family protein