PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076501.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 246aa    MW: 27907.9 Da    PI: 7.4996
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.55.6e-1467119155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +h e+Er+RR+++ + ++ Lr++lP+      ++K s ++   +A +YI++Lq
  XP_011076501.1  67 KKITHREIERQRRQEMSTLYASLRSVLPPdY---LKGKRSTSDQIHEAAKYIRYLQ 119
                     6889*************************66...9********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.71366118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.07E-1466136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.94E-1166123No hitNo description
PfamPF000101.0E-1067119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-1068135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-572124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MESSFFLQLQ QDDEFSIGNT KFSITYPGST IWDVGSGNDF YLGDHVSNLD KLPKEFEGRV  60
GDQDLQKKIT HREIERQRRQ EMSTLYASLR SVLPPDYLKG KRSTSDQIHE AAKYIRYLQN  120
NVRGLGRKRD RIKQSLGNHE LVQSEKAGSS SKILPNIVVT VQTCSVGVEV QISGDVLAEG  180
LILPLSRILQ MMLEQGLVVV CCNWTNFDGR LCYVIQSEVV DYPGIDLQKL QSKLTRMIHT  240
LIDVKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076501.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076501.10.0transcription factor bHLH118
TrEMBLA0A2G9GEF43e-70A0A2G9GEF4_9LAMI; Uncharacterized protein
STRINGMigut.F00404.1.p4e-61(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.14e-34bHLH family protein