PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076315.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 414aa    MW: 45180.7 Da    PI: 7.9647
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.6e-13106152555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h   ErrRRdr+++++  L+ellP+     + K + a+ L +A+++IksLq
  XP_011076315.1 106 HVSCERRRRDRMREKLTSLKELLPTT----ASKSDQASLLDQAIRHIKSLQ 152
                     7789*********************6....69******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.034101151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-15101163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.3E-11105152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-13105156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-10107157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MSGRNSSHDE ANYCNQVVSK NAKSSGGEIP QDLIKFVSNV ELHPILRDPD EQLGESKNKL  60
DASSTKRLRM ECDGDRDRDR DGKYDDEGRE WKMRKHCKTS RSAQVHVSCE RRRRDRMREK  120
LTSLKELLPT TASKSDQASL LDQAIRHIKS LQSQFQVLSM GFHPSHIAHM PAAGQFHSSI  180
QRPSSSAPGR LEKAGIGMGF QVPYSPIPFL TPAPTTISPC VIPSSILHPS STHPLHQEST  240
SNSILPPTSF NPHHLSNVTL QQEVWPLSSH EMPLRRASGS ILNTGIGHGV GENDIPFSGR  300
GSNMFPSTPS DLSALHLSAT GLAPTFGPGV QSVAPALCPA SDSVAPSTYS RFSNFSHSLQ  360
GESGFPIVPR IGPETNQTPL PQDPFATIQS LQALPSSLIS SMLEMVNQTY RNTD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109114ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076315.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076307.10.0transcription factor bHLH119-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.14e-11phytochrome interacting factor 3-like 5