PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_011076269.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

bHLH

Protein Properties

Length: 256aa MW: 28738.5 Da PI: 6.1574

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011076269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.3e-12	70	122	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +h +Er+RR+++ ++ +r+llP ++K ++ L +Av+YIk++q XP_011076269.1 70 KKIMHRDVERQRRQEMSGLYASIRSLLPLeY---VKGKRAISDHLDQAVNYIKHMQ 122 5789***********************77...9******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.45E-14	66	136	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	8.46E-10	67	126	No hit	No description
PROSITE profile	PS50888	12.76	69	121	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.9E-9	71	122	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.2E-10	71	137	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.8E-4	75	127	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence Send to blast
MFPLQSNLIV FEDVPLFLDQ DKILEDLLAD CAVLEGNENT ADQGVKKRQR KASSAAGIQE 60 NKDESSNETK KIMHRDVERQ RRQEMSGLYA SIRSLLPLEY VKGKRAISDH LDQAVNYIKH 120 MQKKLEEMKM RRDKLKNLSN SSAPNVDAED RGSSTTTSSN CLKVKLCWDG VEILICSSLD 180 EGDFPLSKVL ADLLGRGLDV ISCISTRVDG QSLHKIQLQV NDPTSIDLSK LQDRLSDVIE 240 QAQSARGRSR YQESSN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011076269.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011076269.1	0.0	transcription factor bHLH36-like
TrEMBL	A0A2G9G1L6	1e-89	A0A2G9G1L6_9LAMI; Uncharacterized protein
STRING	Migut.F01201.1.p	3e-63	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	2e-40	bHLH family protein