PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011076209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 743aa MW: 81796.3 Da PI: 6.7444 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 54 | 109 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t++q++eLe+ F+ n++p+++ r eL k+lgL+ rqVk+WFqNrR+++k XP_011076209.1 54 RKKYHRHTAYQIQELEASFKDNPHPDEKGRLELGKRLGLEPRQVKFWFQNRRTQMK 109 7999*************************************************999 PP | |||||||
2 | START | 194 | 7.2e-61 | 259 | 482 | 1 | 205 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 ela++a++el+k+a++++p+W +s es+n de++++f++ + + +ea ra+g v+ ++ lve l+d++ qW+e+++ +a+tl XP_011076209.1 259 ELALAAMDELMKLAQLDSPLWYRSLdgggESLNLDEYMKTFPPCIGvkpnhFVTEATRATGTVIINSLALVEALMDVN-QWTEMFPwnigRASTL 352 5899***************************************998999999**************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 +vi++g galqlm+ae+q+lsp+vp R + fvR+++q+g++ w++vdvSvd + +v +++lpSg++++ ++ng skvtwveh+ XP_011076209.1 353 NVICPGmagnrnGALQLMQAEFQVLSPMVPvRQVKFVRFCKQHGQDMWAVVDVSVDTIFHGIRGNTSVNCRRLPSGCIVQNMANGCSKVTWVEHT 447 ************************************************************988999***************************** PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqce 205 +++++++h+l+r+l++sgla+ga++wva lqrqce XP_011076209.1 448 EYDENIIHNLYRPLLRSGLAFGAQKWVANLQRQCE 482 **********************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 7.94E-20 | 40 | 111 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.5E-21 | 48 | 119 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 18.042 | 51 | 111 | IPR001356 | Homeobox domain |
SMART | SM00389 | 7.6E-20 | 53 | 115 | IPR001356 | Homeobox domain |
CDD | cd00086 | 7.30E-19 | 54 | 111 | No hit | No description |
Pfam | PF00046 | 4.1E-18 | 54 | 109 | IPR001356 | Homeobox domain |
PROSITE profile | PS50848 | 40.433 | 250 | 486 | IPR002913 | START domain |
SuperFamily | SSF55961 | 1.92E-29 | 252 | 482 | No hit | No description |
CDD | cd08875 | 7.83E-109 | 254 | 482 | No hit | No description |
Pfam | PF01852 | 8.6E-53 | 259 | 482 | IPR002913 | START domain |
SMART | SM00234 | 6.8E-42 | 259 | 483 | IPR002913 | START domain |
SuperFamily | SSF55961 | 1.51E-15 | 517 | 737 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0008289 | Molecular Function | lipid binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 743 aa Download sequence Send to blast |
MENLGEMGLM GENYDSGLMG RTREDELDSR SGSDNFETAS GDDQNTTENK SSKRKKYHRH 60 TAYQIQELEA SFKDNPHPDE KGRLELGKRL GLEPRQVKFW FQNRRTQMKT QLERHENSIL 120 KQENDKLRIE NIAMKEAMRN PICENCGSPA ILGEVPIEQH HLMIENARLK DELSRLGILA 180 NKFLTRNGGS MPPMVCNSKL DLAVGRNSFC GLNSIDSALP LGLDFGNRVP NAFPMMQTNG 240 PAVGMMGVDA PLDQSLFPEL ALAAMDELMK LAQLDSPLWY RSLDGGGESL NLDEYMKTFP 300 PCIGVKPNHF VTEATRATGT VIINSLALVE ALMDVNQWTE MFPWNIGRAS TLNVICPGMA 360 GNRNGALQLM QAEFQVLSPM VPVRQVKFVR FCKQHGQDMW AVVDVSVDTI FHGIRGNTSV 420 NCRRLPSGCI VQNMANGCSK VTWVEHTEYD ENIIHNLYRP LLRSGLAFGA QKWVANLQRQ 480 CELFATIRSS MASSRDNSAL SANNKSIVML AQRMTRSFCT GVCATVHKWE VVQSSDNTKL 540 MMRKSMGNPG EPPGVIMSAT TTVWMPVLPH HLLEFLQNEK MRSHWDVLSQ DGPMQQMLQI 600 PKGQDPGNNI CLLSTSAPAS SANQSSVLIL QDTCTDTSGS LIVHAAVETT SMNIVVNSGD 660 SSSIAILPSG FAIVPDCYSN SNNSENGNEG HRGGGRSGSL LTVGFQILVN NLPAAKLTME 720 SVDTVKSLIA RTLQGIKSGL QCS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011076209.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076208.1 | 0.0 | homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
Swissprot | Q0WV12 | 0.0 | ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
TrEMBL | A0A4D9BN74 | 0.0 | A0A4D9BN74_SALSN; Homeobox-leucine zipper protein | ||||
STRING | Migut.F00362.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |
Publications ? help Back to Top | |||
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