PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076029.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 342aa    MW: 37749.6 Da    PI: 5.9548
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY894e-28111172159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy WrKYGqK++ g+++pr+YYrCt +   gC+++k+v+rs++dp+++eitY+ +H+++
  XP_011076029.1 111 LDDGYGWRKYGQKDILGAKHPRGYYRCTNRhsqGCMATKQVQRSDDDPTIFEITYKRKHTCN 172
                     59**************************988889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.158106169IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.2E-28108172IPR003657WRKY domain
SuperFamilySSF1182903.79E-25110173IPR003657WRKY domain
SMARTSM007747.0E-40111173IPR003657WRKY domain
PfamPF031063.5E-26112171IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009751Biological Processresponse to salicylic acid
GO:0010193Biological Processresponse to ozone
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MEGSPADLVK ELSRGRELAE QLQIHLNNVH SSSHEARDFL LHRILNSYDQ ALSMLKFSRP  60
GGSEGPALTV SDSPGSPHSD DSDQASRKRK AAEKWTEKVK VWEGIGIEGQ LDDGYGWRKY  120
GQKDILGAKH PRGYYRCTNR HSQGCMATKQ VQRSDDDPTI FEITYKRKHT CNPRPNSSNT  180
INPCTASMPD PNPLSLSENP HQLGARSEQN QQRQPGPEPL FKIQTSLRVI THDLGTEENP  240
PLDPFNFPSS STINPDNVIG NYSPNLLSPA ASGSDYYPIS MNVTNDNYTE LIPNFHTSES  300
ELSPIVAAVT SATNSPTVGA NFPFGSSEFD PNFSFGNPGY YP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-21111171868OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00525DAPTransfer from AT5G24110Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076029.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076029.10.0probable WRKY transcription factor 30
TrEMBLA0A022Q9161e-115A0A022Q916_ERYGU; Uncharacterized protein
STRINGevm.model.supercontig_3.538e-94(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117431922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-40WRKY DNA-binding protein 46