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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011075859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 261aa MW: 29135.8 Da PI: 10.4001 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.7 | 3.3e-10 | 41 | 85 | 2 | 46 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 ++ k rr+++NReAAr+sR+RKka++++Le +L++ ++L+ XP_011075859.1 41 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQ 85 567899*************************98888887776554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-8 | 40 | 103 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-7 | 42 | 85 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.461 | 42 | 86 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.56E-7 | 44 | 87 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.0E-8 | 45 | 89 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 47 | 62 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.3E-11 | 108 | 134 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009410 | Biological Process | response to xenobiotic stimulus | ||||
GO:0009627 | Biological Process | systemic acquired resistance | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MADASPRTDT STDADTEDKN LRFQNNQLQA IVASDGSDKS RDQKTLRRLA QNREAARKSR 60 LRKKAYVQQL ESSRMKLTQL EQELQRARQQ GIFISSSGDQ SQSIGGNGMW KTPAERCFLW 120 LGGFRSSELL KLLINQLEPL TEQQLLAINN LQQSSQQAED ALSQGMEALQ QSLAETLAGS 180 LGPSSSSGNV ANYMGQMAMA MGKLGTLEGF IRQADNLRQQ TLQQMHRILT TRQSARALLA 240 ISDYFSRLRA LSSLWLARPR E |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00349 | DAP | Transfer from AT3G12250 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011075859.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012068691.1 | 1e-147 | transcription factor TGA6 isoform X2 | ||||
Refseq | XP_028063110.1 | 1e-150 | transcription factor TGA6-like isoform X4 | ||||
Swissprot | O24160 | 1e-92 | TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
Swissprot | Q6IVC2 | 2e-92 | TGAL1_ORYSJ; Transcription factor TGAL1 | ||||
TrEMBL | A0A061EW63 | 1e-141 | A0A061EW63_THECC; BZIP domain class transcription factor isoform 1 | ||||
TrEMBL | A0A0D2UWC3 | 1e-141 | A0A0D2UWC3_GOSRA; Uncharacterized protein | ||||
STRING | EFJ30797 | 1e-108 | (Selaginella moellendorffii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 7e-75 | bZIP family protein |
Publications ? help Back to Top | |||
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