 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_011075030.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
| Family |
TCP |
| Protein Properties |
Length: 304aa MW: 32431.1 Da PI: 10.5479 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011075030.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 131.5 | 8e-41 | 87 | 232 | 3 | 119 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88
++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss + s++
XP_011075030.1 87 AAKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSRTTISAPpsksaplf 181
5799****************************************************************999866666666664444455566777 PP
TCP 89 ....................kaaksaakskksqksaasalnlakesrakar 119
+ ++++ +k++ + +++ + a r++ar
XP_011075030.1 182 vggapsmlgfphqltsianfGQDPDENYTKRRFRGDTTSSTSATPGRNSAR 232
777777777777776666663333333333333333333333333443333 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MQFMELPAQK QGNSSNSGHH EAASSLQLLS PHRYHQSQEP GSGSGLAPPN GPFMGSISAQ 60
QSRNLDVSSS SSTPTTANRN DSVTNKAAKK PSKDRHTKVD GRGRRIRMPA LCAARVFQLT 120
RELGHKSDGE TIEWLLQQAE PAIIAATGTG TIPANFSTLN VSLRSSRTTI SAPPSKSAPL 180
FVGGAPSMLG FPHQLTSIAN FGQDPDENYT KRRFRGDTTS STSATPGRNS ARDQEQGSDT 240
KPALFQASSY IPAPPIWAVA PAAASIGNAF WMLPVSGGAG HTVEDVLQLH AENRRFRVFW 300
SGSI
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Can specifically bind site II elements in the promoter region of PP438/PNM1. {ECO:0000269|PubMed:21297037}. |
