PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074590.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 361aa    MW: 39965.3 Da    PI: 4.4324
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-102833231055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_011074590.1 283 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 323
                     9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.983273322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-14275338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-12278332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-11279328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.3E-8283323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MEAIGAFLDE EWESLSKLFS CEDSSDFQLH FDGSNLFSGN GDSPSSPMMF AAAENVAAAD  60
GSLFFPLDTN FYCVSQESSN SSENDSGCFT CPVDVNHQAA NGVSFVHDLT NDSFESMGFC  120
TMDGGNDSLM LPVFPDDLME EVVQLKEDIH IDQMGSVGIQ PVDNGESMLQ LKKKYEAAEI  180
QTQDKGCDNS SDQSPKKRPR VSRDAQKNKR PPVSKKNKKA MQISNEEEEN YVGGNGQSSS  240
PCSSEEDCSN ASQELNESKQ SASKGKAKVT RGAATDPQSL YARRRRERIN ERLRILQNLV  300
PNGTKVDIST MLEEAVHYVK FLQLQIKLLS SDDLWMYAPI AYNGMDIGLY QKVLPNLWPH  360
N
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074590.10.0transcription factor bHLH85-like
TrEMBLA0A022R8Q58e-93A0A022R8Q5_ERYGU; Uncharacterized protein
STRINGMigut.N02774.1.p1e-93(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-42ROOT HAIR DEFECTIVE 6-LIKE 2