PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074403.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 335aa    MW: 36515.3 Da    PI: 10.0426
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.11.3e-31264321359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh 
  XP_011074403.1 264 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHA 321
                     99************************988****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.8E-16215260IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.6E-33250321IPR003657WRKY domain
PROSITE profilePS5081130.917257323IPR003657WRKY domain
SuperFamilySSF1182903.92E-27259322IPR003657WRKY domain
SMARTSM007743.1E-38262322IPR003657WRKY domain
PfamPF031063.2E-27264320IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MAVELMPGYS FTSKMEENAA QEAAAAGLQS VEKLIRLLSH THQQNFSEQS SPKLDPVTTA  60
DYQAVADVAV NKFKKFISLL DRTPRTGHAR FRRGPVSNST PPQQKIESAG PSTQPPKTED  120
SATAPGSRIY CPTPVQRLPP LPVPHHHQQL VKNGSLERKE SSTTINFASP ATSFLSSLTG  180
DTESLQPSMS SGFQITNLSQ VSSAGRPPLS TSSFKRKCSS MDDATAKCGS GSSRCHCPKK  240
RKSRLKRVVR VPAISMKMAD IPPDDYSWRK YGQKPIKGSP HPRGYYKCSS VRGCPARKHV  300
ERALDDPTML IVTYEGEHNH ALSSTEAPAL VLESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21250322273WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00450DAPTransfer from AT4G24240Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074403.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074403.10.0probable WRKY transcription factor 7
SwissprotQ9STX01e-101WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A2G9I8S90.0A0A2G9I8S9_9LAMI; Uncharacterized protein
STRINGMigut.N02732.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.14e-81WRKY DNA-binding protein 7