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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011073134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bHLH | ||||||||
Protein Properties | Length: 288aa MW: 32078.3 Da PI: 9.5976 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.2 | 1.6e-09 | 153 | 200 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+ l+P + +k Ka +L + ++Y++sLq XP_011073134.1 153 SHSLAERVRRERISERLKLLQALVPGC----DKVTGKALMLDEIINYVQSLQ 200 8*************************9....555*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 6.02E-17 | 147 | 215 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.10E-10 | 147 | 204 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.0E-15 | 149 | 214 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.421 | 149 | 199 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.8E-7 | 153 | 200 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.6E-10 | 155 | 205 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence Send to blast |
MAAFSSSSFQ PFLLDSSLFL PTPSPNITKM PQLLEDPTNI PAPQFLHTNE ASAITNKNSV 60 DSSSILTHDD NTTPHQLSHT LPKKRKCKHP SSPNSAQSKD KRQVKEKKQK KVKDDDDDEE 120 KSKSKGEKKG GGRGEAPTGY IHVRARRGQA TDSHSLAERV RRERISERLK LLQALVPGCD 180 KVTGKALMLD EIINYVQSLQ NQVEFLSMKL ASLNPIFYDF GVDLQSIMVR SDQELGNLAS 240 PLPSMQECNP TTGIINNYPP LQNSASNSIL FQEAQIPQSV RNCRKRWA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011073134.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011073133.1 | 0.0 | transcription factor bHLH137 | ||||
TrEMBL | A0A2Z7A0U2 | 1e-93 | A0A2Z7A0U2_9LAMI; DNA binding protein | ||||
STRING | Migut.O00350.1.p | 8e-78 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 2e-51 | bHLH family protein |