PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_011073133.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

bHLH

Protein Properties

Length: 309aa MW: 34568.9 Da PI: 8.4761

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011073133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.1	1.8e-09	153	200	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+ l+P + +k Ka +L + ++Y++sLq XP_011073133.1 153 SHSLAERVRRERISERLKLLQALVPGC----DKVTGKALMLDEIINYVQSLQ 200 8***********************9....555***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	6.8E-17	147	215	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.43E-10	147	204	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.2E-15	149	214	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.421	149	199	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.7E-7	153	200	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.6E-10	155	205	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MAAFSSSSFQ PFLLDSSLFL PTPSPNITKM PQLLEDPTNI PAPQFLHTNE ASAITNKNSV 60 DSSSILTHDD NTTPHQLSHT LPKKRKCKHP SSPNSAQSKD KRQVKEKKQK KVKDDDDDEE 120 KSKSKGEKKG GGRGEAPTGY IHVRARRGQA TDSHSLAERV RRERISERLK LLQALVPGCD 180 KVTGKALMLD EIINYVQSLQ NQVEFLSMKL ASLNPIFYDF GVDLQSIMVR SDQELGNLAS 240 PLPSMQECNP TTGIINNYPP LQNSASNSIL FQEAQIPQGS RDERLWEVEE HRQKIMNQSA 300 FSNSLFSFH

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011073133.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011073133.1	0.0	transcription factor bHLH137
TrEMBL	A0A2Z7A0U2	1e-102	A0A2Z7A0U2_9LAMI; DNA binding protein
STRING	cassava4.1_023959m	1e-86	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4116	23	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	9e-54	bHLH family protein