PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011073133.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 309aa    MW: 34568.9 Da    PI: 8.4761
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011073133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-09153200455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR+ri +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_011073133.1 153 SHSLAERVRRERISERLKLLQALVPGC----DKVTGKALMLDEIINYVQSLQ 200
                     8*************************9....555*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.8E-17147215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.43E-10147204No hitNo description
Gene3DG3DSA:4.10.280.101.2E-15149214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.421149199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.7E-7153200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10155205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MAAFSSSSFQ PFLLDSSLFL PTPSPNITKM PQLLEDPTNI PAPQFLHTNE ASAITNKNSV  60
DSSSILTHDD NTTPHQLSHT LPKKRKCKHP SSPNSAQSKD KRQVKEKKQK KVKDDDDDEE  120
KSKSKGEKKG GGRGEAPTGY IHVRARRGQA TDSHSLAERV RRERISERLK LLQALVPGCD  180
KVTGKALMLD EIINYVQSLQ NQVEFLSMKL ASLNPIFYDF GVDLQSIMVR SDQELGNLAS  240
PLPSMQECNP TTGIINNYPP LQNSASNSIL FQEAQIPQGS RDERLWEVEE HRQKIMNQSA  300
FSNSLFSFH
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011073133.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073133.10.0transcription factor bHLH137
TrEMBLA0A2Z7A0U21e-102A0A2Z7A0U2_9LAMI; DNA binding protein
STRINGcassava4.1_023959m1e-86(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41162345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.29e-54bHLH family protein