PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011072765.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Trihelix
Protein Properties Length: 351aa    MW: 39292.8 Da    PI: 9.4396
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011072765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.74e-1555142186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  + +Li+a  e+  +l+rg+lk+++W++v++ + +++ ++++pk   qCk++++ ++k+yk +k+   ++  ++ s++++fd+l+
  XP_011072765.1  55 CWSEGATAVLIDAWGERYLELSRGNLKQKHWKDVADIVsSREDYTKTPKtdiQCKNRIDTVKKKYKIEKAKIASG--GAPSKWRFFDKLD 142
                     7*************************************866677776654449********************97..67778******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.0E-2653144No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0010431Biological Processseed maturation
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MEDDDEIQSH PSPTPNGRIT VTVAAAPPPS SNCLTLALPI QHHKTPGSGG GREDCWSEGA  60
TAVLIDAWGE RYLELSRGNL KQKHWKDVAD IVSSREDYTK TPKTDIQCKN RIDTVKKKYK  120
IEKAKIASGG APSKWRFFDK LDELIGPTAK INSSTPSPAD PNNAYHRLPM GIPVGVRSST  180
VPQDRFQQKP NRKRPLVDSD DESEPENSLE SSDGLPPESY RRPRIQRQTP ILNNATAARH  240
GMINKKSEGG NGSSNKESNW GNSMRELTRA ILKFGEAYEH AETAKLQQLV EMEKQRMKFA  300
KELELQRMQY FMKTQLELSQ LKSRRPGNNN NHHGINNNND ANNNNNSDSS N
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00356DAPTransfer from AT3G14180Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011072765.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072765.10.0trihelix transcription factor ASIL2
SwissprotQ9LJG81e-105ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2G9I2A21e-179A0A2G9I2A2_9LAMI; Transcription factor GT-2
STRINGMigut.I01197.1.p1e-151(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103321823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.12e-91sequence-specific DNA binding transcription factors