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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_011072679.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family |
ERF |
Protein Properties |
Length: 393aa MW: 43582.2 Da PI: 4.6609 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_011072679.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.4 | 8.4e-19 | 119 | 168 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++ +++++g
XP_011072679.1 119 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDTEARRIRG 168
69*******.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0070483 | Biological Process | detection of hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0005886 | Cellular Component | plasma membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 393 aa
Download sequence Send
to blast |
MCGGAIISDI IAPASRSSRR LTADLLWGSG SVDLYKKKNP GNYHSKPMRS QPVIDLDDDF 60 EADFQEFKDF SDDEGEIDVK KPFSFSASKN PGLKGLKSAD SAEYDDDAEK SSKRKRKNQY 120 RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN TAEEAARAYD TEARRIRGKK AKVNFPEYVP 180 AAASRRTVKV NSHKVLPKGS TESVQPNVNE SVNFMNMLNS DYYDSLGFLE EKPQVKQYGF 240 ADTCPATGDM RLKPLTPTDG TNVYFSSDQG SNSFDCSDFG WGENCAKTPE ISSVLSAVIE 300 DDQAQFMEDG GPAKRAKSSS EDLVPRDENT VNKVSDDLSA FDSQMKLFQM PDLDSNWDAS 360 IDAFLNGDAT QDGANAMDLW SFEDVPAMLG GVY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF278731 | 7e-63 | KF278731.1 Coffea arabica ethylene response factor 5 mRNA, complete cds. |