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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_011071256.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family |
CO-like |
Protein Properties |
Length: 458aa MW: 51592.8 Da PI: 6.2085 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_011071256.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 30.2 | 9.5e-10 | 22 | 65 | 3 | 40 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
+r C+++ +k+++++C ++ +lC++C ++ H+ H++v
XP_011071256.1 22 ARACDNCVRKRARWYCAADDAFLCQSCDSSVHSAnplarrHERV 65
678*****************************667888888876 PP
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2 | CCT | 67.8 | 2.9e-23 | 399 | 442 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk++
XP_011071256.1 399 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 442
9*****************************************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MQELKPMVSD RKLANAVGGK SARACDNCVR KRARWYCAAD DAFLCQSCDS SVHSANPLAR 60 RHERVRLKTA SISSFDDGSK AGLQISVPSW HQGFTRKART PRQKKPGKLI NNSEDPINRI 120 SHPLHLVPEI CSEEQSHEEN EEQLLYRVPI FDPFVAELCT SANSPEVLTT TFQINDEENK 180 RGFGHESKAA ANGFSQEMNH LQGFLPSDMD LAEFAADVES LLGKGLEDES FHMEELGLFD 240 CDEKGKELHD CSNLLPSGRV KVEDEDVAEL MAMGHENHHL DVEFDMGRET FELKFDYGSP 300 VACEEEDIKA QNEERIGWNS CFQECKMGDS SKTFLRLDYE GVLSAWDDKK SPWTTGERPN 360 LDSCDCWPDH CLGTSGAMHV YGEMGRMSGH AAAMADGGRE ARVSRYREKR RTRLFSKKIR 420 YEVRKLNAEK RPRMKGRFVK RSNFAPPAAA AAAANQKY
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 409 | 425 | RRTRLFSKKIRYEVRKL |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G25440.1 | 7e-99 | B-box type zinc finger protein with CCT domain |