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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_011071034.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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| Family |
HD-ZIP |
| Protein Properties |
Length: 316aa MW: 36005.1 Da PI: 4.4593 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011071034.1 | genome | NCBI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.6 | 5.1e-19 | 89 | 142 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t eq++ Le+ Fe ++++ +++ +LAk+lgL+ rqV +WFqNrRa++k
XP_011071034.1 89 KKRRLTVEQVQFLEKSFEVENKLEPDRKVQLAKELGLQPRQVAIWFQNRRARYK 142
56789************************************************9 PP
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| 2 | HD-ZIP_I/II | 125.9 | 1.8e-40 | 88 | 179 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+ eqv++LE+sFe e+kLep+rKv+la+eLglqprqva+WFqnrRAR+ktk lEk+y +Lk+++d+lk++ ++L++e+e+L++e++
XP_011071034.1 88 EKKRRLTVEQVQFLEKSFEVENKLEPDRKVQLAKELGLQPRQVAIWFQNRRARYKTKLLEKEYGSLKASFDKLKADFDTLSAENEKLKNEVQ 179
69**************************************************************************************9997 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MEGCKSYDDS HMENVLLKNE RIPCTSEVLD CLWVPNSSPP FHVSGSAAVV NFEEIRGENS 60
TERPFFTQVD SKVENLSEEF DGCFHQPEKK RRLTVEQVQF LEKSFEVENK LEPDRKVQLA 120
KELGLQPRQV AIWFQNRRAR YKTKLLEKEY GSLKASFDKL KADFDTLSAE NEKLKNEVQL 180
LTQKMLLRDN GKPKLESFDP ISPLDLQPEN PAFSPQAAAC KQEDGASSAK SDILDSDSPR 240
HTDGNFPAIL DPVGSSHDFE PDPSDFSQEE NESLSRSLLQ PTCFPKLEVE CYDDLQPNSC 300
NLGFPVQDQG TWFWQY
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