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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_011070834.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family |
RAV |
Protein Properties |
Length: 374aa MW: 40981.7 Da PI: 8.9022 |
Description |
RAV family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_011070834.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 43.2 | 9.8e-14 | 60 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s++kGV + +grW A+I++ ++r++lg+f +eeAa+a++ a+++++g
XP_011070834.1 60 SRFKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEEEAARAYDTAAQRFRG 108
689***9788.8*********3.....5*************************98 PP
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2 | B3 | 102.6 | 2.2e-32 | 187 | 289 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
f+k+ tpsdv+k++rlv+pk++ae+h +g++ +++ l +ed g++W+++++y+++s++yvltkGW++Fvk+++L++gD+v F+++ +++
XP_011070834.1 187 FEKAVTPSDVGKLNRLVIPKQHAEKHfplqSGNTSKGVLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKDLRAGDIVSFQRSTGPDKQ 281
89****************************88999****************************************************88768888 PP
.EEEEE-S CS
B3 92 lvvkvfrk 99
l++ + ++
XP_011070834.1 282 LYIDWKSR 289
88887665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009741 | Biological Process | response to brassinosteroid |
GO:0009910 | Biological Process | negative regulation of flower development |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0048366 | Biological Process | leaf development |
GO:0048527 | Biological Process | lateral root development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 374 aa
Download sequence Send
to blast |
MDGSCVDEST TSESVSITPA STSPAAAKSP ESLCRVGSGA SVIIDAENGV EAESRKLPSS 60 RFKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEEEAARAYD TAAQRFRGRD AVTNFKPLSE 120 TEEDEVEAAF LNSHSKAEIV DMLRKHTYND ELEQSRRNYN GKRAGKDGPF SFSSGGDRAA 180 NAREQLFEKA VTPSDVGKLN RLVIPKQHAE KHFPLQSGNT SKGVLLNFED MGGKVWRFRY 240 SYWNSSQSYV LTKGWSRFVK EKDLRAGDIV SFQRSTGPDK QLYIDWKSRN TGSNAAVAGV 300 VSGRAQPVQM FRLFGVNILE VPSNCTAPST ATATATVTAT AAIDSNGSCS SKRMRAMEIL 360 GLDCSKKQRV IDAL
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Functional Description ? help
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Source |
Description |
UniProt | Binds specifically to bipartite recognition sequences composed of two unrelated motifs, 5'-CAACA-3' and 5'-CACCTG-3'. May function as negative regulator of plant growth and development. {ECO:0000269|PubMed:15040885, ECO:0000269|PubMed:9862967}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Down-regulated by brassinosteroid and zeatin. {ECO:0000269|PubMed:15040885}. |
Publications
? help Back to Top |
- Matías-Hernández L,Aguilar-Jaramillo AE,Marín-González E,Suárez-López P,Pelaz S
RAV genes: regulation of floral induction and beyond. Ann. Bot., 2014. 114(7): p. 1459-70 [PMID:24812253] - Mittal A,Jiang Y,Ritchie GL,Burke JJ,Rock CD
AtRAV1 and AtRAV2 overexpression in cotton increases fiber length differentially under drought stress and delays flowering. Plant Sci., 2015. 241: p. 78-95 [PMID:26706061] - Huang Y,Feng CZ,Ye Q,Wu WH,Chen YF
Arabidopsis WRKY6 Transcription Factor Acts as a Positive Regulator of Abscisic Acid Signaling during Seed Germination and Early Seedling Development. PLoS Genet., 2016. 12(2): p. e1005833 [PMID:26829043] - Zhao Y, et al.
ABA receptor PYL9 promotes drought resistance and leaf senescence. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(7): p. 1949-54 [PMID:26831097]
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