PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011070419.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 590aa MW: 66052.7 Da PI: 5.2487 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 173.4 | 6.7e-54 | 13 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrF+Ptdeelv++yL+ k++g++ + evi+evd++k+ePwdLp+ +k++++ew+fF++rdkky++g+r+nrat++gyWkatgkd++++ XP_011070419.1 13 LPKGFRFRPTDEELVNHYLRLKINGRHSAV-EVIPEVDVCKWEPWDLPAlsVIKSDDREWFFFCPRDKKYPNGHRSNRATEAGYWKATGKDRTIK 106 799************************888.99***************4458889999************************************* PP NAM 94 skkgel........vglkktLvfykgrapkgektdWvmheyrl 128 s+k++ +g+kktLvfykgrapkge+t+W+mheyr+ XP_011070419.1 107 SRKSSSsgwanphlIGMKKTLVFYKGRAPKGERTNWIMHEYRA 149 *8444455666666***************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.41E-62 | 7 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.576 | 13 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.8E-28 | 14 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0071470 | Biological Process | cellular response to osmotic stress | ||||
GO:1900426 | Biological Process | positive regulation of defense response to bacterium | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005789 | Cellular Component | endoplasmic reticulum membrane | ||||
GO:0005886 | Cellular Component | plasma membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005516 | Molecular Function | calmodulin binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 590 aa Download sequence Send to blast |
MSSCGNTMKL EALPKGFRFR PTDEELVNHY LRLKINGRHS AVEVIPEVDV CKWEPWDLPA 60 LSVIKSDDRE WFFFCPRDKK YPNGHRSNRA TEAGYWKATG KDRTIKSRKS SSSGWANPHL 120 IGMKKTLVFY KGRAPKGERT NWIMHEYRAT EQDLDGTAPG QGDYVLCRLF HKADEKLYNS 180 NYDEVERSGS FPSTNKSSPD DISSDLFREP PMLDTQVLRE PEDIKKWWAD QSDCMTPTNL 240 APVESCASDG VNHSGEETAT EVYAPLREVS MSEEASYSQF DDKVFDALKS QSYTDLGACL 300 GSPFADDFGN EQNGLHFQDG TSEQDASLSD LLEGLQNRGD YSCVVTSESF NPGRIDGQEH 360 TPSAICKVND CKLHGGTDMK MVQPQGQLCP SFPQEVPSTE NSQPNYAVEE VDSSANTVRH 420 SCYKPVETVY DTNPIKNDPI PVIETGIKIR LRQPRDQPSF EKPANQGTAS RRIRLCTGCG 480 PTSISCEKSK GEKDEPQSLV MQATNDIDRT SNCQESEGRI LYENKKTAET HDPTLAVKPG 540 LASIKLSEKL PVHRCSDYLK EYGVSTYLVI IMSVVFLGMW IYPSLHSVHG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-46 | 13 | 175 | 15 | 171 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00108 | PBM | Transfer from AT4G35580 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011070419.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011070419.1 | 0.0 | protein NTM1-like 9 | ||||
Refseq | XP_011070420.1 | 0.0 | protein NTM1-like 9 | ||||
TrEMBL | A0A2G9G544 | 0.0 | A0A2G9G544_9LAMI; Uncharacterized protein | ||||
STRING | Migut.E00715.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14316 | 7 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.3 | 1e-116 | NAC transcription factor-like 9 |